RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 PRDM12Q9H4Q4 367 aa14.25□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
CDK5RAP3-222ENST00000581708 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CUL9Q8IWT3 2517 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MICAL3Q7RTP6 2002 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 KDM3AQ9Y4C1 1321 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 M0QZ92 97 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MSH4O15457 936 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CHRNA1P02708 482 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CTSHP09668 335 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 DEFB103AP81534 67 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MRPS6P82932 125 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 PPP4R3AQ6IN85 833 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 SWSAP1Q6NVH7 229 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MTHFD1LQ6UB35 978 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 RUFY4Q6ZNE9 571 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TSHZ1Q6ZSZ6 1077 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CCDC60Q8IWA6 550 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 DNAJB3Q8WWF6 145 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 GTF3C6Q969F1 213 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CDH23Q9H251 3354 aa14.24□□□□□ -0.13
CDK5RAP3-222ENST00000581708 DDX39AO00148 427 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MAGEB2O15479 319 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 EDIL3O43854 480 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 GAS7O60861 476 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MYOGP15173 224 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 IGBP1P78318 339 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 HTRA4P83105 476 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TAP1Q03518 808 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TCTN1Q2MV58 587 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 FBXO47Q5MNV8 452 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ODR4Q5SWX8 454 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 LRCH2Q5VUJ6 765 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TOP1MTQ969P6 601 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TEKT3Q9BXF9 490 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 FTHL17Q9BXU8 183 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 DISC1Q9NRI5 854 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 MYH9P35579 1960 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 COL4A6Q14031 1691 aa14.23□□□□□ -0.13
CDK5RAP3-222ENST00000581708 IGSF9BQ9UPX0 1349 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 PTPRSQ13332 1948 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CCDC194A0A1B0GVG4 234 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 PSMD10O75832 226 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CTDNEP1O95476 244 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 KLRC1P26715 233 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 LPIN1Q14693 890 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ME3Q16798 604 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 NEK8Q86SG6 692 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 FAM20AQ96MK3 541 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 AIFM3Q96NN9 605 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 SAMD11Q96NU1 681 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 NRBP2Q9NSY0 501 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TRPV2Q9Y5S1 764 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CDY2AQ9Y6F7 541 aa14.22□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TBX3O15119 743 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 SEC24BO95487 1268 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 GHRP10912 638 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ATP4AP20648 1035 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ERVK-21P61565 698 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ADGRE1Q14246 886 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 B3GNT9Q6UX72 402 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.21□□□□□ -0.132e-13■■■■□ 22.1
CDK5RAP3-222ENST00000581708 MYOCDQ8IZQ8 938 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 ETNPPLQ8TBG4 499 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 TGS1Q96RS0 853 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 FAM49AQ9H0Q0 323 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 GABBR1Q9UBS5 961 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 DDX25Q9UHL0 483 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 KCNJ14Q9UNX9 436 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 LIMCH1Q9UPQ0 1083 aa14.21□□□□□ -0.13
CDK5RAP3-222ENST00000581708 PRUNE2Q8WUY3 3088 aa14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 ZBTB42B2RXF5 422 aa14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 TMOD1P28289 359 aa14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 KIAA0319LQ8IZA0 1049 aa14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 ZSCAN31Q96LW9 406 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 LLPHQ9BRT6 129 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 UNC80Q8N2C7 3258 aa14.2□□□□□ -0.14
CDK5RAP3-222ENST00000581708 LINC01553A4QN01 128 aa14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 DKC1O60832 514 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 TDP2O95551 362 aa14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 C22orf31O95567 290 aa14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 OATP04181 439 aa14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 FDPSP14324 419 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 IGFBP4P22692 258 aa14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 KRT2P35908 639 aa14.19□□□□□ -0.14
CDK5RAP3-222ENST00000581708 CDC42EP1Q00587 391 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms