RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RPLP2P05387 115 aaKnown RBP22.06■■□□□ 1.12
SREBF1-220ENST00000581707 CA3P07451 260 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 INF2Q27J81 1249 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 MOXD1Q6UVY6 613 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 TMCO2Q7Z6W1 182 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-220ENST00000581707 CKAP2LQ8IYA6 745 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 NSUN7Q8NE18 718 aaKnown RBP22.06■■□□□ 1.12
SREBF1-220ENST00000581707 ZBED2Q9BTP6 218 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 FAM49AQ9H0Q0 323 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-220ENST00000581707 LIMCH1Q9UPQ0 1083 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 SAMM50Q9Y512 469 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 PCDHA2Q9Y5H9 948 aa22.06■■□□□ 1.12
SREBF1-220ENST00000581707 TLL1O43897 1013 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 ATP4AP20648 1035 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 MGAT3Q09327 533 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 LRCH2Q5VUJ6 765 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 MTHFD1LQ6UB35 978 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 SLC17A8Q8NDX2 589 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 MAFAQ8NHW3 353 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-220ENST00000581707 MBOAT7Q96N66 472 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 GABBR1Q9UBS5 961 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 MAFBQ9Y5Q3 323 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-220ENST00000581707 MICAL3Q7RTP6 2002 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 CHD7Q9P2D1 2997 aa22.05■■□□□ 1.12
SREBF1-220ENST00000581707 WDR81Q562E7 1941 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 KLRC1P26715 233 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 MRPS6P82932 125 aaKnown RBP22.04■■□□□ 1.12
SREBF1-220ENST00000581707 LETM2Q2VYF4 491 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 ZNF484Q5JVG2 852 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.04■■□□□ 1.12
SREBF1-220ENST00000581707 OXER1Q8TDS5 423 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 GJA10Q969M2 543 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 GAS2L1Q99501 681 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-220ENST00000581707 TEKT3Q9BXF9 490 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 IFIH1Q9BYX4 1025 aaKnown RBP22.04■■□□□ 1.12
SREBF1-220ENST00000581707 DISC1Q9NRI5 854 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 DDX25Q9UHL0 483 aaKnown RBP22.04■■□□□ 1.12
SREBF1-220ENST00000581707 CDY2AQ9Y6F7 541 aa22.04■■□□□ 1.12
SREBF1-220ENST00000581707 COL1A2P08123 1366 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 PSMD10O75832 226 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 GJB5O95377 273 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 AMHP03971 560 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 GHRP10912 638 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 MKRN4PQ13434 485 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-220ENST00000581707 IER5Q5VY09 327 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 BBXQ8WY36 941 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-220ENST00000581707 APBB2Q92870 758 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 KIF2CQ99661 725 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 UNC45AQ9H3U1 944 aa22.03■■□□□ 1.12
SREBF1-220ENST00000581707 EYSQ5T1H1 3165 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 SIP14410 1827 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 SMIM35A0A1B0GVV1 85 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 CHMP2AO43633 222 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 JAK2O60674 1132 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 SFNP31947 248 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 JAK3P52333 1124 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 LPIN1Q14693 890 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 FAM117BQ6P1L5 589 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 PIK3AP1Q6ZUJ8 805 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 TRMT1LQ7Z2T5 733 aaKnown RBP22.02■■□□□ 1.12
SREBF1-220ENST00000581707 NEK8Q86SG6 692 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 MYOCDQ8IZQ8 938 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 NME8Q8N427 588 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 ETNPPLQ8TBG4 499 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 RAD9AQ99638 391 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 BRMS1Q9HCU9 246 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 EVPLQ92817 2033 aa22.02■■□□□ 1.12
SREBF1-220ENST00000581707 ZBTB42B2RXF5 422 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 M0QZ92 97 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 KRT2P35908 639 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 TAP1Q03518 808 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 ST3GAL1Q11201 340 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 FBXO47Q5MNV8 452 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 PPP4R3AQ6IN85 833 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 IGSF9BQ9UPX0 1349 aa22.01■■□□□ 1.11
SREBF1-220ENST00000581707 SLC37A4O43826 429 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 ARHGEF15O94989 841 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 GCFC2P16383 781 aaKnown RBP22■■□□□ 1.11
SREBF1-220ENST00000581707 TMEM62Q0P6H9 643 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 TRIM29Q14134 588 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 MIER3Q7Z3K6 550 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 RDM1Q8NG50 284 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 FAM167AQ96KS9 214 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 NAP1L4Q99733 375 aaKnown RBP22■■□□□ 1.11
SREBF1-220ENST00000581707 TRPV2Q9Y5S1 764 aa22■■□□□ 1.11
SREBF1-220ENST00000581707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.99■■□□□ 1.11
SREBF1-220ENST00000581707 LCHNA4D1U4 455 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 ZNF862O60290 1169 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 CCNT1O60563 726 aaKnown RBP21.99■■□□□ 1.11
SREBF1-220ENST00000581707 IGFBP4P22692 258 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 RBM25P49756 843 aaKnown RBP21.99■■□□□ 1.11
SREBF1-220ENST00000581707 NR5A1Q13285 461 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 ADGRE1Q14246 886 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 EARS2Q5JPH6 523 aaKnown RBP21.99■■□□□ 1.11
SREBF1-220ENST00000581707 TSHZ1Q6ZSZ6 1077 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 CCDC83Q8IWF9 413 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 KIAA0319LQ8IZA0 1049 aa21.99■■□□□ 1.11
SREBF1-220ENST00000581707 ZSCAN31Q96LW9 406 aaPredicted RBP21.99■■□□□ 1.11
SREBF1-220ENST00000581707 CELF4Q9BZC1 486 aaKnown RBP21.99■■□□□ 1.11
SREBF1-220ENST00000581707 CERS4Q9HA82 394 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms