RNA–Protein interactions for RNA: ENST00000581246.5

MSL1-208, Transcript of male specific lethal 1 homolog, human

TSL 4

Gene MSL1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL1-208	ENST00000581246	PSMC5	P62195	406 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	CCDC173	Q0VFZ6	552 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	SREBF2	Q12772	1141 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	COASY	Q13057	564 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	SPATA1	Q5VX52	437 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	TAPT1	Q6NXT6	567 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	KCNV1	Q6PIU1	500 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	ARMCX2	Q7L311	632 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	CYFIP1	Q7L576	1253 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	MPHOSPH6	Q99547	160 aa	Known RBP	11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	REEP2	Q9BRK0	252 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	JPH1	Q9HDC5	661 aa	Predicted RBP	11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	ANKEF1	Q9NU02	776 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	EXOC1	Q9NV70	894 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	PANK4	Q9NVE7	773 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	FANCL	Q9NW38	375 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	RWDD2A	Q9UIY3	292 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	ABT1	Q9ULW3	272 aa	Known RBP	11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	ZSWIM8	A7E2V4	1837 aa		11.44	□□□□□ -0.58
MSL1-208	ENST00000581246	RASSF10	A6NK89	507 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	FARP2	O94887	1054 aa	Predicted RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	SUPT20HL2	P0C7V6	817 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	ATP4A	P20648	1035 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	ZNF75D	P51815	510 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	ZNF131	P52739	623 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	PMS1	P54277	932 aa	Known RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	MAPK7	Q13164	816 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CRHR2	Q13324	411 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	NEDD9	Q14511	834 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	TMEM63B	Q5T3F8	832 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CDKAL1	Q5VV42	579 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CENPP	Q6IPU0	288 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CYP4F22	Q6NT55	531 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	TTI2	Q6NXR4	508 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	APTX	Q7Z2E3	356 aa	Known RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CCDC65	Q8IXS2	484 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	TRMT44	Q8IYL2	757 aa	Known RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	GUF1	Q8N442	669 aa	Known RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	GLIS3	Q8NEA6	775 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	NPLOC4	Q8TAT6	608 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	NELFB	Q8WX92	580 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	CCDC47	Q96A33	483 aa	Known RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	MAML3	Q96JK9	1138 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	PCYT2	Q99447	389 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	DUSP9	Q99956	384 aa	Known RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	FGFBP2	Q9BYJ0	223 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	ZFYVE28	Q9HCC9	887 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	SLC39A2	Q9NP94	309 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	PDGFC	Q9NRA1	345 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	KCND2	Q9NZV8	630 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	GJD2	Q9UKL4	321 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	MAPK8IP1	Q9UQF2	711 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	IVNS1ABP	Q9Y6Y0	642 aa		11.43	□□□□□ -0.58
MSL1-208	ENST00000581246	IGSF9B	Q9UPX0	1349 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	RSPH10B2	B2RC85	870 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	CA12	O43570	354 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	PSAP	P07602	524 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	HOXC6	P09630	235 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	RSPH10B	P0C881	870 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	ATP1A3	P13637	1013 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	IDE	P14735	1019 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	CCNE1	P24864	410 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	GUCY2C	P25092	1073 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	CTGF	P29279	349 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	PPP1R2	P41236	205 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	RARRES1	P49788	294 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	STX17	P56962	302 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	PAK1	Q13153	545 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	LY6K	Q17RY6	165 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	CELF3	Q5SZQ8	465 aa	Known RBP	11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	KLHL10	Q6JEL2	608 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	SWSAP1	Q6NVH7	229 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	FOXR2	Q6PJQ5	311 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	METTL7B	Q6UX53	244 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	ANO5	Q75V66	913 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	EEPD1	Q7L9B9	569 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	IRF2BP1	Q8IU81	584 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	FBXO16	Q8IX29	292 aa	Predicted RBP	11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	DAW1	Q8N136	415 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	FIZ1	Q96SL8	496 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	SEMA6B	Q9H3T3	888 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	VTA1	Q9NP79	307 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	PDLIM7	Q9NR12	457 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	SAMSN1	Q9NSI8	373 aa	Known RBP	11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	GABBR1	Q9UBS5	961 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	CTNND2	Q9UQB3	1225 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	NFE2L3	Q9Y4A8	694 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	SAMM50	Q9Y512	469 aa		11.42	□□□□□ -0.58
MSL1-208	ENST00000581246	SYNRG	Q9UMZ2	1314 aa		11.41	□□□□□ -0.58
MSL1-208	ENST00000581246	TMEM150B	A6NC51	233 aa		11.41	□□□□□ -0.58
MSL1-208	ENST00000581246	ATMIN	O43313	823 aa	Predicted RBP	11.41	□□□□□ -0.58
MSL1-208	ENST00000581246	LGR5	O75473	907 aa		11.41	□□□□□ -0.58
MSL1-208	ENST00000581246	GGPS1	O95749	300 aa		11.41	□□□□□ -0.58
MSL1-208	ENST00000581246	YWHAB	P31946	246 aa	Known RBP	11.41	□□□□□ -0.58
MSL1-208	ENST00000581246	HOXD13	P35453	343 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms