RNA–Protein interactions for RNA: ENST00000580977.1

C19orf47-205, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 4

Gene C19orf47, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-205ENST00000580977 COL1A2P08123 1366 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 IGLV3-22A0A075B6J6 115 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 H3BNC9 293 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 BACH1O14867 736 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
C19orf47-205ENST00000580977 TMEM192Q8IY95 271 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 BICD2Q8TD16 824 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 NECAB3Q96P71 396 aaPredicted RBP17.08■□□□□ 0.32
C19orf47-205ENST00000580977 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
C19orf47-205ENST00000580977 TCEAL9Q9UHQ7 104 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 NCOR1O75376 2440 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
C19orf47-205ENST00000580977 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 DDX39AO00148 427 aaKnown RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 ENPP3O14638 875 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 HBP1O60381 514 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 CCNE2O96020 404 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 CD52P31358 61 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 GPM6BQ13491 265 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 PKN1Q16512 942 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 ABHD15Q6UXT9 468 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 FAM43BQ6ZT52 329 aaPredicted RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 CCDC60Q8IWA6 550 aaPredicted RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 NME8Q8N427 588 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 ATP8B4Q8TF62 1192 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 TRAPPC12Q8WVT3 735 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 ZBTB10Q96DT7 871 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 UBE2ZQ9H832 354 aaPredicted RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 AGO3Q9H9G7 860 aaKnown RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
C19orf47-205ENST00000580977 ZNF302Q9NR11 478 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
C19orf47-205ENST00000580977 C5orf67F2Z3F1 127 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 RB1P06400 928 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 IFNAR1P17181 557 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 CTNNB1P35222 781 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
C19orf47-205ENST00000580977 MTHFD1LQ6UB35 978 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 PHKBQ93100 1093 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 ZNF577Q9BSK1 485 aa17.06■□□□□ 0.32
C19orf47-205ENST00000580977 CELF4Q9BZC1 486 aaKnown RBP17.06■□□□□ 0.32
C19orf47-205ENST00000580977 TTC3P53804 2025 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.05■□□□□ 0.32
C19orf47-205ENST00000580977 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
C19orf47-205ENST00000580977 EVCP57679 992 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 KRT76Q01546 638 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 TMEM62Q0P6H9 643 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 PAK2Q13177 524 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 NTRK3Q16288 839 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 ZNF484Q5JVG2 852 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 PDXDC2PQ6P474 469 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 SMAP1Q8IYB5 467 aaPredicted RBP17.05■□□□□ 0.32
C19orf47-205ENST00000580977 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 LINC01599Q8WXQ3 324 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 C11orf84Q9BUA3 381 aaPredicted RBP17.05■□□□□ 0.32
C19orf47-205ENST00000580977 PADI3Q9ULW8 664 aa17.05■□□□□ 0.32
C19orf47-205ENST00000580977 BDP1A6H8Y1 2624 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 KLRC1P26715 233 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
C19orf47-205ENST00000580977 CIITAP33076 1130 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 BTG3Q14201 252 aaPredicted RBP17.04■□□□□ 0.32
C19orf47-205ENST00000580977 LEXMQ3ZCV2 418 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 NPAS4Q8IUM7 802 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 CLP1Q92989 425 aaKnown RBP17.04■□□□□ 0.32
C19orf47-205ENST00000580977 ZNF689Q96CS4 500 aaPredicted RBP17.04■□□□□ 0.32
C19orf47-205ENST00000580977 SLC26A6Q9BXS9 759 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 LMAN2LQ9H0V9 348 aa17.04■□□□□ 0.32
C19orf47-205ENST00000580977 NSUN3Q9H649 340 aaKnown RBP17.04■□□□□ 0.32
C19orf47-205ENST00000580977 BRWD1Q9NSI6 2320 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 DGKIO75912 1065 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 LINC00271P0C7V0 271 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 KCNA5P22460 613 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 BMPR1AP36894 532 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 PRR16Q569H4 304 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 ODR4Q5SWX8 454 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 SWSAP1Q6NVH7 229 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 CMTR2Q8IYT2 770 aaKnown RBP17.03■□□□□ 0.32
C19orf47-205ENST00000580977 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
C19orf47-205ENST00000580977 PLVAPQ9BX97 442 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 SH3GLB2Q9NR46 395 aa17.03■□□□□ 0.32
C19orf47-205ENST00000580977 MAFBQ9Y5Q3 323 aaPredicted RBP17.03■□□□□ 0.32
C19orf47-205ENST00000580977 LOXHD1Q8IVV2 1947 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 ADAMTS3O15072 1205 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 PSAPP07602 524 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.32
C19orf47-205ENST00000580977 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 RASGRP4Q8TDF6 673 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 VPS54Q9P1Q0 977 aa17.02■□□□□ 0.32
C19orf47-205ENST00000580977 CEP131Q9UPN4 1083 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms