RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GGPS1O95749 300 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 LGALS2P05162 132 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 NR3C2P08235 984 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 PDHBP11177 359 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 GNAT2P19087 354 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 RUFY4Q6ZNE9 571 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 SIRT2Q8IXJ6 389 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 KBTBD3Q8NAB2 608 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 CYP2W1Q8TAV3 490 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 CDCA3Q99618 268 aaPredicted RBP9□□□□□ -0.97
SMARCE1-217ENST00000580654 CPVLQ9H3G5 476 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 SEMA4AQ9H3S1 761 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 AGO3Q9H9G7 860 aaKnown RBP9□□□□□ -0.97
SMARCE1-217ENST00000580654 PNMA2Q9UL42 364 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 NR2E1Q9Y466 385 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 TELO2Q9Y4R8 837 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 KAT6AQ92794 2004 aa9□□□□□ -0.97
SMARCE1-217ENST00000580654 GPR179Q6PRD1 2367 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 SNHG28P0DPA3 235 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 UBA1P22314 1058 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 KCNC4Q03721 635 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 ZNF543Q08ER8 600 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 LLGL2Q6P1M3 1020 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 FEZF2Q8TBJ5 459 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 RASGRP4Q8TDF6 673 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 MICAL1Q8TDZ2 1067 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 LMBR1Q8WVP7 490 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 PXMP2Q9NR77 195 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
SMARCE1-217ENST00000580654 HIDE1A8MVS5 230 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 OPLAHO14841 1288 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 RANBP6O60518 1105 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 SLC3A2P08195 630 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 TOP1P11387 765 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 ATXN1P54253 815 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 UBE3AQ05086 875 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 APOBRQ0VD83 1088 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 FBXO47Q5MNV8 452 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 ARHGEF16Q5VV41 709 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 TRIM50Q86XT4 487 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 ZDHHC14Q8IZN3 488 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 IL31RAQ8NI17 732 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 RUBCNQ92622 972 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 MAF1Q9H063 256 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 NAPBQ9H115 298 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 ERVK-5Q9HDB9 667 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 ASPMQ8IZT6 3477 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 ABCB11O95342 1321 aa8.98□□□□□ -0.97
SMARCE1-217ENST00000580654 FSD2A1L4K1 749 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 RAB11FIP3O75154 756 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 FGF18O76093 207 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 FGRP09769 529 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 WEE2P0C1S8 567 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 GOLGA8HP0CJ92 632 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 HOXB8P17481 243 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 CD52P31358 61 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 ARHGAP4P98171 946 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 CDC37Q16543 378 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 PLPP4Q5VZY2 271 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 TSHZ1Q6ZSZ6 1077 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 FTSJ3Q8IY81 847 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 SUMF1Q8NBK3 374 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 RIN2Q8WYP3 895 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 RTP3Q9BQQ7 232 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 PDCD2LQ9BRP1 358 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 NACAP1Q9BZK3 213 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 UBA5Q9GZZ9 404 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 ADAM7Q9H2U9 754 aa8.97□□□□□ -0.97
SMARCE1-217ENST00000580654 ORC4O43929 436 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 SMARCA5O60264 1052 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 SRGAP2BP0DMP2 458 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 GNAT1P11488 350 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 MYCLP12524 364 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 HSD17B4P51659 736 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 KANK3Q6NY19 840 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 KCNV1Q6PIU1 500 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 VSIG10LQ86VR7 867 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 NECTIN4Q96NY8 510 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 GPR20Q99678 358 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 TMX1Q9H3N1 280 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 MLXIPQ9HAP2 919 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 TCP11L1Q9NUJ3 509 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 TMEM260Q9NX78 707 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 ANAPC4Q9UJX5 808 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 CDY2AQ9Y6F7 541 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 CCDC171Q6TFL3 1326 aa8.96□□□□□ -0.98
SMARCE1-217ENST00000580654 C2orf16Q68DN1 1984 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 ZFYP08048 801 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 ADRB1P08588 477 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 SP9P0CG40 484 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 HSPD1P10809 573 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 SCG2P13521 617 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 SDHBP21912 280 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 GHRHRQ02643 423 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 ITIH3Q06033 890 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 PGM5Q15124 567 aa8.95□□□□□ -0.98
SMARCE1-217ENST00000580654 MARCH8Q5T0T0 291 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms