RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 PCDHA1Q9Y5I3 950 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 MBLAC1A4D2B0 266 aaPredicted RBP10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 B4E1Z4 1266 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 IGBP1P78318 339 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 UBE3AQ05086 875 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 NEDD9Q14511 834 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 GNPTABQ3T906 1256 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 SPOUT1Q5T280 376 aaKnown RBP10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 RSPH3Q86UC2 560 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 UBALD2Q8IYN6 164 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 MTMR8Q96EF0 704 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 CDCA3Q99618 268 aaPredicted RBP10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 TMX1Q9H3N1 280 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 RNF41Q9H4P4 317 aaPredicted RBP10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 FRMPD4Q14CM0 1322 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 FANCMQ8IYD8 2048 aa10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
SMARCD2-208ENST00000580054 FRYLO94915 3013 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 EVPLQ92817 2033 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 HIDE1A8MVS5 230 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 GCOM1H8Y6P7 765 aaPredicted RBP10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 ZBTB5O15062 677 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 FIBPO43427 364 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 WEE2P0C1S8 567 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 POLR2MP0CAP2 368 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 STAG3L1P0CL83 205 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 TCF7P36402 384 aaPredicted RBP10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 TMEM266Q2M3C6 531 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 DGLUCYQ7Z3D6 616 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 TICAM2Q86XR7 235 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 THNSL1Q8IYQ7 743 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 COLGALT1Q8NBJ5 622 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 FLCNQ8NFG4 579 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 FEZF2Q8TBJ5 459 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 RILPL2Q969X0 211 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 ZSCAN10Q96SZ4 725 aaPredicted RBP10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 FTHL17Q9BXU8 183 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 MFSD1Q9H3U5 465 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 TMEM260Q9NX78 707 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 PADI3Q9ULW8 664 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 NR2E1Q9Y466 385 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 PCDHB12Q9Y5F1 795 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 TRPV2Q9Y5S1 764 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 GPR179Q6PRD1 2367 aa10.72□□□□□ -0.69
SMARCD2-208ENST00000580054 TBKBP1A7MCY6 615 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 KLRF2D3W0D1 207 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 ZNF213O14771 459 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 PI15O43692 258 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 MGEA5O60502 916 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 SRGAP2BP0DMP2 458 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 PAK2Q13177 524 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 FAM102BQ5T8I3 360 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 C2orf16Q68DN1 1984 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 IQCA1Q86XH1 822 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 KIAA2013Q8IYS2 634 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 CNTNAP3BQ96NU0 1288 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 PIGSQ96S52 555 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 TCF25Q9BQ70 676 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 CNTNAP3Q9BZ76 1288 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 LNPKQ9C0E8 428 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 ENTPD7Q9NQZ7 604 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 IGSF9BQ9UPX0 1349 aa10.71□□□□□ -0.69
SMARCD2-208ENST00000580054 GSTTP1A0A1W2PQM5 241 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 FSD2A1L4K1 749 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 ATP9AO75110 1047 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 PBX3P40426 434 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 SARSP49591 514 aaKnown RBP10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 CLCN5P51795 746 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 HDAC1Q13547 482 aaPredicted RBP10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 ANGPT1Q15389 498 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 CCDC178Q5BJE1 867 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 CCDC105Q8IYK2 499 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 TRAPPC12Q8WVT3 735 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 CWH43Q9H720 699 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 TYW1Q9NV66 732 aaKnown RBP10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 MAD2L2Q9UI95 211 aa10.7□□□□□ -0.7
SMARCD2-208ENST00000580054 STAM2O75886 525 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 FGFR1P11362 822 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 INSRRP14616 1297 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 KCNA2P16389 499 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 NPR3P17342 541 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 HOXB8P17481 243 aaPredicted RBP10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 SDSP20132 328 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 IER5Q5VY09 327 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 PDE12Q6L8Q7 609 aaKnown RBP10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 KANK3Q6NY19 840 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 TDRD5Q8NAT2 981 aaKnown RBP10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
SMARCD2-208ENST00000580054 ERAP1Q9NZ08 941 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms