RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 FAM207AQ9NSI2 230 aaPredicted RBP5.12□□□□□ -1.59
NUP85-213ENST00000579838 ZNF446Q9NWS9 450 aa5.12□□□□□ -1.59
NUP85-213ENST00000579838 GGA3Q9NZ52 723 aa5.12□□□□□ -1.59
NUP85-213ENST00000579838 GPRC5DQ9NZD1 345 aa5.12□□□□□ -1.59
NUP85-213ENST00000579838 LUC7L2Q9Y383 392 aaKnown RBP5.12□□□□□ -1.59
NUP85-213ENST00000579838 RABGAP1Q9Y3P9 1069 aa5.12□□□□□ -1.59
NUP85-213ENST00000579838 COL4A3BPQ9Y5P4 624 aa5.12□□□□□ -1.59
NUP85-213ENST00000579838 EPN1Q9Y6I3 576 aaPredicted RBP5.12□□□□□ -1.59
NUP85-213ENST00000579838 PLXNA1Q9UIW2 1896 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 IPO5O00410 1097 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 VWA5AO00534 786 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 RRP9O43818 475 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 NRDCO43847 1150 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 SORBS3O60504 671 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 GAS7O60861 476 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 FLOT1O75955 427 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 AKAP3O75969 853 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 STBD1O95210 358 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 ATP1A1P05023 1023 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 C7P10643 843 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 MYCLP12524 364 aaPredicted RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 H2AFXP16104 143 aaPredicted RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 ZSCAN20P17040 1043 aaPredicted RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 SLC9A1P19634 815 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 HNRNPH3P31942 346 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 EIF4A3P38919 411 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 ZNF131P52739 623 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 HMGCS2P54868 508 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 RPS6P62753 249 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 AMPD2Q01433 879 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 CYP27A1Q02318 531 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 PPP2R3AQ06190 1150 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 TMEM132BQ14DG7 1078 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 ASTE1Q2TB18 679 aaPredicted RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 CCDC40Q4G0X9 1142 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 PCNX4Q63HM2 1172 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 GJB7Q6PEY0 223 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 RSRC2Q7L4I2 434 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 DNAAF5Q86Y56 855 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 PDCL2Q8N4E4 241 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 PRPF38AQ8NAV1 312 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 LPAR1Q92633 364 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 UPF1Q92900 1129 aaKnown RBP eCLIP5.11□□□□□ -1.59
NUP85-213ENST00000579838 JAKMIP2Q96AA8 810 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 BORCS6Q96GS4 357 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 CEP63Q96MT8 703 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 TRERF1Q96PN7 1200 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 SH2D3AQ9BRG2 576 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 PDCD2LQ9BRP1 358 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 LXNQ9BS40 222 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 CRACR2AQ9BSW2 395 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 STRA6Q9BX79 667 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 GTPBP4Q9BZE4 634 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 MMRN2Q9H8L6 949 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 NHEJ1Q9H9Q4 299 aaPredicted RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 MLXIPQ9HAP2 919 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 NLRC4Q9NPP4 1024 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 JADE2Q9NQC1 790 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 PXMP2Q9NR77 195 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 KCNH7Q9NS40 1196 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 BMP2KQ9NSY1 1161 aaPredicted RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 RNF146Q9NTX7 359 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 HDAC6Q9UBN7 1215 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 SALL4Q9UJQ4 1053 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 DNM3Q9UQ16 869 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 TRAF3IP3Q9Y228 551 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 SNCAIPQ9Y6H5 919 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 DUSP10Q9Y6W6 482 aa5.11□□□□□ -1.59
NUP85-213ENST00000579838 MYH9P35579 1960 aaKnown RBP5.11□□□□□ -1.59
NUP85-213ENST00000579838 GOLGA6L9A6NEM1 432 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 SPDYE4A6NLX3 237 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 EIF3CLB5ME19 914 aaKnown RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 BACH1O14867 736 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 HIP1RO75146 1068 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 LRRN2O75325 713 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 USP2O75604 605 aaPredicted RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 PPP1R37O75864 691 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 RGS20O76081 388 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 DDNO94850 711 aaPredicted RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 SEC31AO94979 1220 aaKnown RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 GCNT3O95395 438 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 MOCS3O95396 460 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 LCA5LO95447 670 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 NR3C1P04150 777 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 TPM1P09493 284 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 PNMA6AP0CW24 399 aaPredicted RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 BCRP11274 1271 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 ANK1P16157 1881 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 TRIM21P19474 475 aaKnown RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 NR2F2P24468 414 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 HOXA7P31268 230 aaPredicted RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 KIF11P52732 1056 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 SOX10P56693 466 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 BACE1P56817 501 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 FKBP3Q00688 224 aaKnown RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 SETQ01105 290 aaPredicted RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 ADAM9Q13443 819 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 TNFAIP1Q13829 316 aa5.1□□□□□ -1.59
NUP85-213ENST00000579838 BAATQ14032 418 aaPredicted RBP5.1□□□□□ -1.59
NUP85-213ENST00000579838 HSP90AA2PQ14568 343 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms