RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 FAM49AQ9H0Q0 323 aaPredicted RBP29.63■■■□□ 2.33
LIMD2-208ENST00000579814 UPF2Q9HAU5 1272 aaKnown RBP29.63■■■□□ 2.33
LIMD2-208ENST00000579814 GABBR1Q9UBS5 961 aa29.63■■■□□ 2.33
LIMD2-208ENST00000579814 DDX25Q9UHL0 483 aaKnown RBP29.63■■■□□ 2.33
LIMD2-208ENST00000579814 PCDHA2Q9Y5H9 948 aa29.63■■■□□ 2.33
LIMD2-208ENST00000579814 TRIP12Q14669 1992 aaPredicted RBP29.63■■■□□ 2.33
LIMD2-208ENST00000579814 SFNP31947 248 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 KRT2P35908 639 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 TRIM29Q14134 588 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 ZNF484Q5JVG2 852 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 PPP2R2DQ66LE6 453 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 PIK3AP1Q6ZUJ8 805 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 TRAPPC12Q8WVT3 735 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 ZBED2Q9BTP6 218 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 SCN5AQ14524 2016 aa29.62■■■□□ 2.33
LIMD2-208ENST00000579814 JAK3P52333 1124 aa29.61■■■□□ 2.33
LIMD2-208ENST00000579814 IER5Q5VY09 327 aa29.61■■■□□ 2.33
LIMD2-208ENST00000579814 MTHFD1LQ6UB35 978 aa29.61■■■□□ 2.33
LIMD2-208ENST00000579814 BBXQ8WY36 941 aaPredicted RBP29.61■■■□□ 2.33
LIMD2-208ENST00000579814 APBB2Q92870 758 aa29.61■■■□□ 2.33
LIMD2-208ENST00000579814 ZBTB10Q96DT7 871 aa29.61■■■□□ 2.33
LIMD2-208ENST00000579814 NAP1L4Q99733 375 aaKnown RBP29.61■■■□□ 2.33
LIMD2-208ENST00000579814 SMIM35A0A1B0GVV1 85 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 CHMP2AO43633 222 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 TLL1O43897 1013 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 PSMD10O75832 226 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 GCFC2P16383 781 aaKnown RBP29.6■■■□□ 2.33
LIMD2-208ENST00000579814 ATP4AP20648 1035 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 KLRC1P26715 233 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 DEFB103AP81534 67 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 PPP4R3AQ6IN85 833 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 NME8Q8N427 588 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 GJA10Q969M2 543 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 UNC45AQ9H3U1 944 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 COL1A2P08123 1366 aa29.6■■■□□ 2.33
LIMD2-208ENST00000579814 TANC1Q9C0D5 1861 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 M0QZ92 97 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 AMHP03971 560 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 FOSL2P15408 326 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 MRPS6P82932 125 aaKnown RBP29.59■■■□□ 2.33
LIMD2-208ENST00000579814 MGAT3Q09327 533 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 TRMT1LQ7Z2T5 733 aaKnown RBP29.59■■■□□ 2.33
LIMD2-208ENST00000579814 CCDC83Q8IWF9 413 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 RDM1Q8NG50 284 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 FAM167AQ96KS9 214 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 LLPHQ9BRT6 129 aaKnown RBP29.59■■■□□ 2.33
LIMD2-208ENST00000579814 IFIH1Q9BYX4 1025 aaKnown RBP29.59■■■□□ 2.33
LIMD2-208ENST00000579814 OSBPL7Q9BZF2 842 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 SH2B1Q9NRF2 756 aaPredicted RBP29.59■■■□□ 2.33
LIMD2-208ENST00000579814 CDY2AQ9Y6F7 541 aa29.59■■■□□ 2.33
LIMD2-208ENST00000579814 CCNT1O60563 726 aaKnown RBP29.58■■■□□ 2.33
LIMD2-208ENST00000579814 CA3P07451 260 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 GHRP10912 638 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 ST3GAL1Q11201 340 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 NR5A1Q13285 461 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 MIER3Q7Z3K6 550 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 TET1Q8NFU7 2136 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 ETNPPLQ8TBG4 499 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 NRBP2Q9NSY0 501 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 CEP131Q9UPN4 1083 aa29.58■■■□□ 2.33
LIMD2-208ENST00000579814 MMP1P03956 469 aa29.57■■■□□ 2.32
LIMD2-208ENST00000579814 RABEP1Q15276 862 aa29.57■■■□□ 2.32
LIMD2-208ENST00000579814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.57■■■□□ 2.32
LIMD2-208ENST00000579814 FAM20AQ96MK3 541 aa29.57■■■□□ 2.32
LIMD2-208ENST00000579814 GAS2L1Q99501 681 aaPredicted RBP29.57■■■□□ 2.32
LIMD2-208ENST00000579814 PRDM12Q9H4Q4 367 aa29.57■■■□□ 2.32
LIMD2-208ENST00000579814 SLC37A4O43826 429 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 MARCH6O60337 910 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 GJB5O95377 273 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 FOSBP53539 338 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 KRT40Q6A162 431 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 TMCO2Q7Z6W1 182 aaPredicted RBP29.56■■■□□ 2.32
LIMD2-208ENST00000579814 RAD9AQ99638 391 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 TRPV2Q9Y5S1 764 aa29.56■■■□□ 2.32
LIMD2-208ENST00000579814 IGSF9BQ9UPX0 1349 aa29.55■■■□□ 2.32
LIMD2-208ENST00000579814 LPIN1Q14693 890 aa29.55■■■□□ 2.32
LIMD2-208ENST00000579814 FBXO47Q5MNV8 452 aa29.55■■■□□ 2.32
LIMD2-208ENST00000579814 MYOCDQ8IZQ8 938 aa29.55■■■□□ 2.32
LIMD2-208ENST00000579814 IL27Q8NEV9 243 aa29.55■■■□□ 2.32
LIMD2-208ENST00000579814 SQORQ9Y6N5 450 aa29.55■■■□□ 2.32
LIMD2-208ENST00000579814 ZBTB42B2RXF5 422 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 BTBD18B2RXH4 712 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 HMGN5P82970 282 aaKnown RBP29.54■■■□□ 2.32
LIMD2-208ENST00000579814 TMEM62Q0P6H9 643 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 MKRN4PQ13434 485 aaPredicted RBP29.54■■■□□ 2.32
LIMD2-208ENST00000579814 SAFBQ15424 915 aaKnown RBP eCLIP29.54■■■□□ 2.32
LIMD2-208ENST00000579814 EARS2Q5JPH6 523 aaKnown RBP29.54■■■□□ 2.32
LIMD2-208ENST00000579814 B3GNT9Q6UX72 402 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 DIS3L2Q8IYB7 885 aaKnown RBP29.54■■■□□ 2.32
LIMD2-208ENST00000579814 USP38Q8NB14 1042 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 TNFRSF25Q93038 417 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 CELF4Q9BZC1 486 aaKnown RBP29.54■■■□□ 2.32
LIMD2-208ENST00000579814 KCNMB3Q9NPA1 279 aa29.54■■■□□ 2.32
LIMD2-208ENST00000579814 RBAK-RBAKDNI3L0D1 243 aa29.53■■■□□ 2.32
LIMD2-208ENST00000579814 TBX3O15119 743 aa29.53■■■□□ 2.32
LIMD2-208ENST00000579814 MAGEB2O15479 319 aa29.53■■■□□ 2.32
LIMD2-208ENST00000579814 ST18O60284 1047 aa29.53■■■□□ 2.32
LIMD2-208ENST00000579814 OATP04181 439 aa29.53■■■□□ 2.32
LIMD2-208ENST00000579814 FAM117BQ6P1L5 589 aa29.53■■■□□ 2.32
LIMD2-208ENST00000579814 TSHZ1Q6ZSZ6 1077 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms