RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	NLRP10	Q86W26	655 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	SPATS2	Q86XZ4	545 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	PASD1	Q8IV76	773 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	TRIM48	Q8IWZ4	208 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	RPUSD2	Q8IZ73	545 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	C2orf69	Q8N8R5	385 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	PRPF38A	Q8NAV1	312 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	FLAD1	Q8NFF5	587 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	SEC14L1	Q92503	715 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	BOC	Q9BWV1	1114 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	SLC6A20	Q9NP91	592 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	BTG4	Q9NY30	223 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	DDX56	Q9NY93	547 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	DCC	P43146	1447 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	FAM135B	Q49AJ0	1406 aa		5.22	□□□□□ -1.57
MSI2-211	ENST00000579531	RGPD8	O14715	1765 aa	Predicted RBP	5.21	□□□□□ -1.57
MSI2-211	ENST00000579531	RALGAPB	Q86X10	1494 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	ABCC11	Q96J66	1382 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	FMN2	Q9NZ56	1722 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	SLC12A8	A0AV02	714 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	ZNF561-AS1	K7EIQ3	104 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	HGS	O14964	777 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	HIP1R	O75146	1068 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	ULK1	O75385	1050 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	ZBTB7A	O95365	584 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	CYBB	P04839	570 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	PYGM	P11217	842 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	POU3F3	P20264	500 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	DSG1	Q02413	1049 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	MVK	Q03426	396 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	STRN3	Q13033	797 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	SLC9A5	Q14940	896 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	NR1I3	Q14994	352 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	OLFML2B	Q68BL8	750 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	ABHD17C	Q6PCB6	329 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	FERMT3	Q86UX7	667 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	TEX2	Q8IWB9	1127 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	UHMK1	Q8TAS1	419 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	WDR66	Q8TBY9	1149 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	PEX11G	Q96HA9	241 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	PUS7L	Q9H0K6	701 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	SMOC1	Q9H4F8	434 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	C14orf93	Q9H972	538 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	EBF1	Q9UH73	591 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	CTNND2	Q9UQB3	1225 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	ZNF652	Q9Y2D9	606 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	COQ6	Q9Y2Z9	468 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	RWDD3	Q9Y3V2	267 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	KIF1A	Q12756	1690 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	CDC42BPG	Q6DT37	1551 aa		5.21	□□□□□ -1.58
MSI2-211	ENST00000579531	TONSL	Q96HA7	1378 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	ASXL1	Q8IXJ9	1541 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531		H7C1D1	291 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	TRAF5	O00463	557 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	BIN1	O00499	593 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	ABLIM1	O14639	778 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	GPR39	O43194	453 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	PDGFRB	P09619	1106 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	GLI4	P10075	376 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	FPR2	P25090	351 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	ITGB7	P26010	798 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	IL2	P60568	153 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	ZNF174	Q15697	407 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	SEPT7	Q16181	437 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	ZNF792	Q3KQV3	632 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	ZMYM1	Q5SVZ6	1142 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	BICRAL	Q6AI39	1079 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	PAQR3	Q6TCH7	311 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	NFXL1	Q6ZNB6	911 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	EFHB	Q8N7U6	833 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	UBR7	Q8N806	425 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	SMC1B	Q8NDV3	1235 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	KCNJ15	Q99712	375 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	RC3H2	Q9HBD1	1191 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	MBNL3	Q9NUK0	354 aa	Known RBP	5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	GPR160	Q9UJ42	338 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	FBXL7	Q9UJT9	491 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	DSE	Q9UL01	958 aa		5.2	□□□□□ -1.58
MSI2-211	ENST00000579531	AKAP12	Q02952	1782 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	TOPAZ1	Q8N9V7	1692 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	PTPDC1	A2A3K4	754 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	NOTO	A8MTQ0	251 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	HRK	O00198	91 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	CLASP2	O75122	1294 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	RAB11FIP3	O75154	756 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	FKBP9	O95302	570 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	MPO	P05164	745 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	RNASE1	P07998	156 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	PDE6A	P16499	860 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	KPNA1	P52294	538 aa	Predicted RBP	5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	ERVFRD-1	P60508	538 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	STAT4	Q14765	748 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	STEAP3	Q658P3	488 aa		5.19	□□□□□ -1.58
MSI2-211	ENST00000579531	ARHGAP36	Q6ZRI8	547 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms