RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	NPAS4	Q8IUM7	802 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	CMTR2	Q8IYT2	770 aa	Known RBP	11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	MICAL1	Q8TDZ2	1067 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	POF1B	Q8WVV4	589 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PPP2R3C	Q969Q6	453 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PCYT2	Q99447	389 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PHOX2B	Q99453	314 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PLVAP	Q9BX97	442 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	HCST	Q9UBK5	93 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	SLC9A2	Q9UBY0	812 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PADI3	Q9ULW8	664 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PCDHA6	Q9UN73	950 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	PCDHA8	Q9Y5H6	950 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	UBIAD1	Q9Y5Z9	338 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	ZDBF2	Q9HCK1	2354 aa		11.02	□□□□□ -0.65
MSI2-208	ENST00000579466	SH2B2	O14492	632 aa	Predicted RBP	11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	PER2	O15055	1255 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	SGSM2	O43147	1006 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	SP100	P23497	879 aa	Predicted RBP	11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	PLCB4	Q15147	1175 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	MICU3	Q86XE3	530 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	CYP2W1	Q8TAV3	490 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	SPPL3	Q8TCT6	385 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	RPGRIP1	Q96KN7	1286 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	MFSD14A	Q96MC6	490 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	CLEC1B	Q9P126	229 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	USP15	Q9Y4E8	981 aa	Predicted RBP	11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	KMT2E	Q8IZD2	1858 aa		11.01	□□□□□ -0.65
MSI2-208	ENST00000579466	RRN3P2	A6NIE6	340 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	GLP2R	O95838	553 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	STAG3L1	P0CL83	205 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	AR	P10275	920 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	MCM5	P33992	734 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	GNAQ	P50148	359 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	ACTR2	P61160	394 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	KRT76	Q01546	638 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11	□□□□□ -0.65
MSI2-208	ENST00000579466	EFHB	Q8N7U6	833 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	PRSS33	Q8NF86	280 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	P2RX5	Q93086	422 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	MSLNL	Q96KJ4	702 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	LZTS2	Q9BRK4	669 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	SDF4	Q9BRK5	362 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	APOL5	Q9BWW9	433 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	FTHL17	Q9BXU8	183 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	CELF4	Q9BZC1	486 aa	Known RBP	11	□□□□□ -0.65
MSI2-208	ENST00000579466	TMX1	Q9H3N1	280 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	JADE2	Q9NQC1	790 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	KCNH7	Q9NS40	1196 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	SLC12A7	Q9Y666	1083 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	IGSF9B	Q9UPX0	1349 aa		11	□□□□□ -0.65
MSI2-208	ENST00000579466	MYH9	P35579	1960 aa	Known RBP	10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	TMEM221	A6NGB7	291 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	TBKBP1	A7MCY6	615 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466		M0R296	226 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	BACH1	O14867	736 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	MGEA5	O60502	916 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	STAT5B	P51692	787 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	NAPA	P54920	295 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	IRX6	P78412	446 aa	Predicted RBP	10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	ITGB3BP	Q13352	177 aa	Predicted RBP	10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	IER5L	Q5T953	404 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	WWC2	Q6AWC2	1192 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	MTHFD1L	Q6UB35	978 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	TMTC3	Q6ZXV5	915 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	THNSL1	Q8IYQ7	743 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	SMRP1	Q8NCR6	262 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	EDA	Q92838	391 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	MAP4K1	Q92918	833 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	PBXIP1	Q96AQ6	731 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	MAP3K14	Q99558	947 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	MXRA8	Q9BRK3	442 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	TLE6	Q9H808	572 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	PCDHB7	Q9Y5E2	793 aa		10.99	□□□□□ -0.65
MSI2-208	ENST00000579466	DENND3	A2RUS2	1198 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	RPS6KA5	O75582	802 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	EYA4	O95677	639 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	CALM1	P0DP23	149 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	CALM2	P0DP24	149 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	CALM3	P0DP25	149 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	FGFR1	P11362	822 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	SMARCA1	P28370	1054 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	SARS	P49591	514 aa	Known RBP	10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	APOBR	Q0VD83	1088 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	FAM102B	Q5T8I3	360 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	PLPP4	Q5VZY2	271 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TYW1B	Q6NUM6	668 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TRIM67	Q6ZTA4	783 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	SUGP1	Q8IWZ8	645 aa	Known RBP	10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	CRIPAK	Q8N1N5	446 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TMEM40	Q8WWA1	233 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TMEM87B	Q96K49	555 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TCEANC2	Q96MN5	208 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	ADAM2	Q99965	735 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	ANO3	Q9BYT9	981 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	CDHR5	Q9HBB8	845 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TLR9	Q9NR96	1032 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	FAM86C1	Q9NVL1	165 aa		10.98	□□□□□ -0.65
MSI2-208	ENST00000579466	TMEM260	Q9NX78	707 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms