RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 CCDC129Q6ZRS4 1044 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 USP53Q70EK8 1073 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 OVCH1Q7RTY7 1134 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 MTDHQ86UE4 582 aaKnown RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 ZNF527Q8NB42 609 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 KCT2Q8NC54 265 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 GALNT6Q8NCL4 622 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 FAM13CQ8NE31 585 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 LRTOMTQ8WZ04 291 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 KIAA1191Q96A73 305 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 LTV1Q96GA3 475 aaPredicted RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 BTBD6Q96KE9 485 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 RMDN3Q96TC7 470 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 MYCBPQ99417 103 aaPredicted RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 APOL5Q9BWW9 433 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 MRPL9Q9BYD2 267 aaKnown RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 ELAC1Q9H777 363 aaKnown RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 CD248Q9HCU0 757 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 ITM2CQ9NQX7 267 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 IFT80Q9P2H3 777 aaPredicted RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 ABCF2Q9UG63 623 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 MAGED1Q9Y5V3 778 aaPredicted RBP4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 CHD1O14646 1710 aa4.96□□□□□ -1.62
GAPLINC-201ENST00000578664 A0A087X0M5 115 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 A0A1B0GX30 115 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 J3QW42 95 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 WNT9AO14904 365 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 GSTA4O15217 222 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 FFAR2O15552 330 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 KCNH1O95259 989 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 GHRHP01286 108 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 SNRPB2P08579 225 aaKnown RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 MYF5P13349 255 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 ITGA4P13612 1032 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 AGXTP21549 392 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 KRT20P35900 424 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 ATP11AP98196 1134 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 FOXO1Q12778 655 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 IKBKEQ14164 716 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 POLD3Q15054 466 aaPredicted RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CEP135Q66GS9 1140 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 DCAF15Q66K64 600 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CREB3L3Q68CJ9 461 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 IQCEQ6IPM2 695 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 HIBCHQ6NVY1 386 aaPredicted RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 KCNT2Q6UVM3 1135 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 TTLL7Q6ZT98 887 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 ILDR2Q71H61 639 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 OTOP1Q7RTM1 612 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 SNX32Q86XE0 403 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 TMTC1Q8IUR5 882 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 MRPL41Q8IXM3 137 aaKnown RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CMIPQ8IY22 773 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 SYTL1Q8IYJ3 562 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CACNA2D3Q8IZS8 1091 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 ZNF610Q8N9Z0 462 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 KREMEN2Q8NCW0 462 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 PCDH19Q8TAB3 1148 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 TTC9Q92623 222 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 ATP6V1E2Q96A05 226 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 NT5C1BQ96P26 610 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 BARD1Q99728 777 aaKnown RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 LPIN3Q9BQK8 851 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CHCHD6Q9BRQ6 235 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 STK31Q9BXU1 1019 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 B3GNT5Q9BYG0 378 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 JMJD4Q9H9V9 463 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 GP6Q9HCN6 339 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 DCP1AQ9NPI6 582 aaPredicted RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CCM2LQ9NUG4 571 aaPredicted RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 FRRS1LQ9P0K9 344 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 TJP2Q9UDY2 1190 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 CGGBP1Q9UFW8 167 aaPredicted RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 NPFFR2Q9Y5X5 522 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 RSF1Q96T23 1441 aaPredicted RBP4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 USP19O94966 1318 aa4.95□□□□□ -1.62
GAPLINC-201ENST00000578664 IRAK2O43187 625 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 XBP1P17861 261 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 ALAS2P22557 587 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 XPAP23025 273 aaPredicted RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 CTNNA1P35221 906 aaKnown RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 STAT1P42224 750 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 MAN2A2P49641 1150 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 SMAD3P84022 425 aaKnown RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 ZNF543Q08ER8 600 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 PAK1Q13153 545 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 AUHQ13825 339 aaKnown RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 PRKG1Q13976 671 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 COL9A3Q14050 684 aaPredicted RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 DCTN1Q14203 1278 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 CNN3Q15417 329 aaKnown RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 TESK1Q15569 626 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 SMAD2Q15796 467 aaKnown RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 GRIK5Q16478 980 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 HSF5Q4G112 596 aaPredicted RBP4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 FRMD7Q6ZUT3 714 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 CHSY3Q70JA7 882 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 FAM35AQ86V20 835 aa4.94□□□□□ -1.62
GAPLINC-201ENST00000578664 ESX1Q8N693 406 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms