RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ALX1Q15699 326 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CDC37Q16543 378 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 DUSP6Q16828 381 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZC3H14Q6PJT7 736 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SAMD3Q8N6K7 520 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 BBC3Q96PG8 261 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RTP3Q9BQQ7 232 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PDCD2LQ9BRP1 358 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 USP26Q9BXU7 913 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TLE6Q9H808 572 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZNF215Q9UL58 517 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NR2E1Q9Y466 385 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MYH6P13533 1939 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 DOPEY1Q5JWR5 2465 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 DENND4AQ7Z401 1863 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZMYM6O95789 1325 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NRCAMQ92823 1304 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ENPP3O14638 875 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CSPG5O95196 566 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CHRNA1P02708 482 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MGAT3Q09327 533 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 KCNC3Q14003 757 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 LPIN1Q14693 890 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TSHZ1Q6ZSZ6 1077 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RSPH3Q86UC2 560 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 KLHL23Q8NBE8 558 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 VN1R2Q8NFZ6 395 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 LMBR1Q8WVP7 490 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TBC1D5Q92609 795 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NECTIN4Q96NY8 510 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SEC62Q99442 399 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 FTHL17Q9BXU8 183 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 S1PR5Q9H228 398 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 DCTPP1Q9H773 170 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CACNA2D2Q9NY47 1150 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SQORQ9Y6N5 450 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 KAT6AQ92794 2004 aa8.34□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 KRT38O76015 456 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ASGR2P07307 311 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 STAG3L1P0CL83 205 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ASPRV1Q53RT3 343 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FBXO47Q5MNV8 452 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 METTL7BQ6UX53 244 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 STOX1Q6ZVD7 989 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RBM23Q86U06 439 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LINC01599Q8WXQ3 324 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MLXIPQ9HAP2 919 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SETD4Q9NVD3 440 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ANKFY1Q9P2R3 1169 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 USP18Q9UMW8 372 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LZTS1Q9Y250 596 aa8.33□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TTC41PQ6P2S7 1318 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MBLAC1A4D2B0 266 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 OPLAHO14841 1288 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FSCN2O14926 492 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 STAM2O75886 525 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CFBP00751 764 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 KCNA4P22459 653 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CCND2P30279 289 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SP2Q02086 613 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 NEDD9Q14511 834 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PGM5Q15124 567 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 QRICH1Q2TAL8 776 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 GNPTABQ3T906 1256 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TPRNQ4KMQ1 711 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LARP1BQ659C4 914 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 B4GALNT3Q6L9W6 998 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ANKRD54Q6NXT1 300 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SYCE2Q6PIF2 218 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DGKHQ86XP1 1220 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ADGRF4Q8IZF3 695 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 INPP4AQ96PE3 977 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ERVK-5Q9HDB9 667 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 AAASQ9NRG9 546 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TOMM22Q9NS69 142 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PCDHB12Q9Y5F1 795 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FREM2Q5SZK8 3169 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MYO9AB2RTY4 2548 aa8.32□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SHROOM3Q8TF72 1996 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 FRMPD4Q14CM0 1322 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 C2CD4DB7Z1M9 353 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MYCLP12524 364 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SCG2P13521 617 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 RBM25P49756 843 aaKnown RBP8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ITIH3Q06033 890 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CCDC178Q5BJE1 867 aa8.31□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms