RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 MAGEB2O15479 319 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 SLITRK3O94933 977 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 PARNO95453 639 aaKnown RBP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 OATP04181 439 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 KLRC1P26715 233 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 MDM2Q00987 491 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 SPIRE1Q08AE8 756 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 RESTQ13127 1097 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 ARL6IP4Q66PJ3 421 aaKnown RBP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 SERINC5Q86VE9 423 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 C4orf19Q8IY42 314 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 EXOC8Q8IYI6 725 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 ZNF396Q96N95 335 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 NOC4LQ9BVI4 516 aaKnown RBP12.93□□□□□ -0.34
ERBB2-208ENST00000578630 LRWD1Q9UFC0 647 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 TUBE1Q9UJT0 475 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 PCDHA2Q9Y5H9 948 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 COL1A2P08123 1366 aa12.93□□□□□ -0.34
ERBB2-208ENST00000578630 IGSF9BQ9UPX0 1349 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 MBLAC1A4D2B0 266 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-208ENST00000578630 ZNF862O60290 1169 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 CAND2O75155 1236 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERBB2-208ENST00000578630 TMOD1P28289 359 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 CYP2C18P33260 490 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 ANP32AP39687 249 aaKnown RBP12.92□□□□□ -0.34
ERBB2-208ENST00000578630 THPOP40225 353 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 CCL23P55773 120 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 ADAM17P78536 824 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 ATP2C1P98194 919 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-208ENST00000578630 PRKCEQ02156 737 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.345e-9■■□□□ 13.6
ERBB2-208ENST00000578630 HIC1Q14526 733 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 SF3A1Q15459 793 aaKnown RBP12.92□□□□□ -0.34
ERBB2-208ENST00000578630 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 NME8Q8N427 588 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 KAT6AQ92794 2004 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 DYDC2Q96IM9 177 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 NIFKQ9BYG3 293 aaKnown RBP12.92□□□□□ -0.34
ERBB2-208ENST00000578630 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 TUFT1Q9NNX1 390 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 RGL1Q9NZL6 768 aa12.92□□□□□ -0.34
ERBB2-208ENST00000578630 POTEMA6NI47 508 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 IQCF3P0C7M6 154 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 CKBP12277 381 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 SELPP16109 830 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 MUTP22033 750 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 ITGB8P26012 769 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 BMP8BP34820 402 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 RFC2P35250 354 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 CYP4A11Q02928 519 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 FPGSQ05932 587 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 UGCGQ16739 394 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 MARCH8Q5T0T0 291 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 IER5Q5VY09 327 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 RPAINQ86UA6 219 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 LXNQ9BS40 222 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 UBE2OQ9C0C9 1292 aaKnown RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-208ENST00000578630 PPME1Q9Y570 386 aa12.91□□□□□ -0.34
ERBB2-208ENST00000578630 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 RSPH10B2B2RC85 870 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 M0QZ92 97 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 LYPLA2O95372 231 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 F13A1P00488 732 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 RSPH10BP0C881 870 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 RPA1P27694 616 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 YWHABP31946 246 aaKnown RBP12.9□□□□□ -0.34
ERBB2-208ENST00000578630 DNM2P50570 870 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 RBL2Q08999 1139 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 MTERF2Q49AM1 385 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 FAM173BQ6P4H8 233 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 LRRC8DQ7L1W4 858 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 IGSF22Q8N9C0 903 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 TRAPPC12Q8WVT3 735 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 DNAJB3Q8WWF6 145 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 NACC1Q96RE7 527 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 CTAGE1Q96RT6 745 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 GDF15Q99988 308 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 ANKEF1Q9NU02 776 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 CFAP45Q9UL16 551 aa12.9□□□□□ -0.34
ERBB2-208ENST00000578630 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms