RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	B4GALT3	O60512	393 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GPR32	O75388	356 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NFASC	O94856	1347 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	C22orf31	O95567	290 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ITGB1	P05556	798 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CYP3A4	P08684	503 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ATF7	P17544	494 aa	Predicted RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KCNA5	P22460	613 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KIF5B	P33176	963 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	BMPR1A	P36894	532 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	IGBP1	P78318	339 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FAM189B	P81408	668 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MRPS6	P82932	125 aa	Known RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ZP2	Q05996	745 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GPM6B	Q13491	265 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MTMR1	Q13613	665 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PFKFB3	Q16875	520 aa	Predicted RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TMEM266	Q2M3C6	531 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GNPTAB	Q3T906	1256 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CEP55	Q53EZ4	464 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	JAKMIP3	Q5VZ66	844 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MTHFD1L	Q6UB35	978 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PLPPR4	Q7Z2D5	763 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	HEATR3	Q7Z4Q2	680 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ADGRA3	Q8IWK6	1321 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FBXL16	Q8N461	479 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SPPL3	Q8TCT6	385 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SEPT8	Q92599	483 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PHKB	Q93100	1093 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MSLNL	Q96KJ4	702 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NEK1	Q96PY6	1258 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	LZTS2	Q9BRK4	669 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	LARP6	Q9BRS8	491 aa	Known RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ZBED2	Q9BTP6	218 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ZMYND12	Q9H0C1	365 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FAM49A	Q9H0Q0	323 aa	Predicted RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TSPYL2	Q9H2G4	693 aa	Predicted RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ADAMTS10	Q9H324	1103 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NCOA5	Q9HCD5	579 aa	Known RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	JPH1	Q9HDC5	661 aa	Predicted RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GJB4	Q9NTQ9	266 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ERAP1	Q9NZ08	941 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SLC9A2	Q9UBY0	812 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CDH22	Q9UJ99	828 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TUBE1	Q9UJT0	475 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PADI3	Q9ULW8	664 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	COG5	Q9UP83	839 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PLAGL2	Q9UPG8	496 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NOC2L	Q9Y3T9	749 aa	Known RBP	5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KDM3A	Q9Y4C1	1321 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PCDHA2	Q9Y5H9	948 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SLC12A7	Q9Y666	1083 aa		5.1	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ZDBF2	Q9HCK1	2354 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SMIM35	A0A1B0GVV1	85 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ESYT2	A0FGR8	921 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ERICH2	A1L162	156 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SMCO2	A6NFE2	343 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CCDC69	A6NI79	296 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MEIS3P2	A8K0S8	358 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KIF28P	B7ZC32	967 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NOP56	O00567	594 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	WNT7A	O00755	349 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ZBTB43	O43298	467 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GTPBP6	O43824	516 aa	Predicted RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GPR37L1	O60883	481 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	EFCAB14	O75071	495 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	AMH	P03971	560 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	KLRC1	P26715	233 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PDIA3	P30101	505 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CIITA	P33076	1130 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	GNAQ	P50148	359 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ST3GAL1	Q11201	340 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MAPK8IP2	Q13387	824 aa	Predicted RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ADAM15	Q13444	863 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SART3	Q15020	963 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SKIV2L	Q15477	1246 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TARBP2	Q15633	366 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	RTN1	Q16799	776 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	EARS2	Q5JPH6	523 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FAM102B	Q5T8I3	360 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PTCRA	Q6ISU1	281 aa	Predicted RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TAF2	Q6P1X5	1199 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CASC1	Q6TDU7	716 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NFXL1	Q6ZNB6	911 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TSHZ1	Q6ZSZ6	1077 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NIPA1	Q7RTP0	329 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	NLRX1	Q86UT6	975 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	FAM228A	Q86W67	206 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	TMTC2	Q8N394	836 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ZNF579	Q8NAF0	562 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	BANK1	Q8NDB2	785 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	ATP8B4	Q8TF62	1192 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	BRF1	Q92994	677 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	PABPC5	Q96DU9	382 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	IL17RA	Q96F46	866 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	MBOAT7	Q96N66	472 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CELF4	Q9BZC1	486 aa	Known RBP	5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	SMARCAD1	Q9H4L7	1026 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	CWH43	Q9H720	699 aa		5.09	□□□□□ -1.59
PPP4R1-209	ENST00000578329	WRAP73	Q9P2S5	460 aa	Predicted RBP	5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms