RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 WRAP73Q9P2S5 460 aaPredicted RBP19.3■□□□□ 0.68
ERBB2-205ENST00000578199 FAM184BQ9ULE4 1060 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 GCOM1H8Y6P7 765 aaPredicted RBP19.3■□□□□ 0.68
ERBB2-205ENST00000578199 PJA2O43164 708 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 SLC26A4O43511 780 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 TBCAO75347 108 aaKnown RBP19.3■□□□□ 0.68
ERBB2-205ENST00000578199 POLR2MP0CAP2 368 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 ARP10275 920 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 PCDHB13Q9Y5F0 798 aa19.3■□□□□ 0.68
ERBB2-205ENST00000578199 PHACTR2O75167 634 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 KLHL30Q0D2K2 578 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 KLHDC7AQ5VTJ3 777 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 ZNF772Q68DY9 489 aaPredicted RBP19.29■□□□□ 0.68
ERBB2-205ENST00000578199 OGFOD1Q8N543 542 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 MYCT1Q8N699 235 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 MS4A14Q96JA4 679 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 ALS2CR12Q96Q35 445 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.29■□□□□ 0.68
ERBB2-205ENST00000578199 COL4A5P29400 1685 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 PSMD10O75832 226 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 NR3C1P04150 777 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 KLRC1P26715 233 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 PDE4CQ08493 712 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 DPY19L2P1Q6NXN4 242 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 TLR10Q9BXR5 811 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 PKD2L1Q9P0L9 805 aa19.29■□□□□ 0.68
ERBB2-205ENST00000578199 RBAK-RBAKDNI3L0D1 243 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 PDXKO00764 312 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 AFPP02771 609 aaKnown RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 CYP2C19P33261 490 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 TNNT3P45378 269 aaPredicted RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 COG2Q14746 738 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 GJB7Q6PEY0 223 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 GMLQ99445 158 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 LRRC1Q9BTT6 524 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 GBP3Q9H0R5 595 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 VPS18Q9P253 973 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 AJAP1Q9UKB5 411 aaPredicted RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 PACSIN2Q9UNF0 486 aaPredicted RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 DDX39AO00148 427 aaKnown RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 TGFB1I1O43294 461 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 CALUO43852 315 aaPredicted RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 VIL1P09327 827 aaKnown RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 XRCC5P13010 732 aaKnown RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 PON1P27169 355 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 SLC7A5Q01650 507 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 DGKZQ13574 1117 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 FRMD5Q7Z6J6 570 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 SYN2Q92777 582 aaPredicted RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 NOX5Q96PH1 765 aa19.28■□□□□ 0.68
ERBB2-205ENST00000578199 RANBP17Q9H2T7 1088 aaKnown RBP19.28■□□□□ 0.68
ERBB2-205ENST00000578199 FTCDO95954 541 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 PTK2Q05397 1052 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 ASIC2Q16515 512 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 SLC18A3Q16572 532 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 SPATA4Q8NEY3 305 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 CCDC102AQ96A19 550 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 RPGRIP1Q96KN7 1286 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 AGBL1Q96MI9 1066 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 NUCKS1Q9H1E3 243 aaKnown RBP19.27■□□□□ 0.68
ERBB2-205ENST00000578199 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 ADAM21Q9UKJ8 722 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 SHTN1A0MZ66 631 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 FAM170AA1A519 330 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 GAS7O60861 476 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 PALMO75781 387 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 UCHL3P15374 230 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 EXOC3L4Q17RC7 722 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 KIAA0753Q2KHM9 967 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 SPDYE2Q495Y8 402 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 C1orf186Q6ZWK4 172 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 LDHDQ86WU2 507 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 RBM46Q8TBY0 533 aaKnown RBP19.27■□□□□ 0.68
ERBB2-205ENST00000578199 UNC45AQ9H3U1 944 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 TYW1Q9NV66 732 aaKnown RBP19.27■□□□□ 0.68
ERBB2-205ENST00000578199 AIPL1Q9NZN9 384 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 HYOU1Q9Y4L1 999 aa19.27■□□□□ 0.68
ERBB2-205ENST00000578199 FAM13AO94988 1023 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 RXRBP28702 533 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 CEP55Q53EZ4 464 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 TTLL6Q8N841 843 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 SLC5A5Q92911 643 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 ZNF577Q9BSK1 485 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 DMGDHQ9UI17 866 aaKnown RBP19.26■□□□□ 0.67
ERBB2-205ENST00000578199 NBPF9Q3BBW0 867 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 ZNF571Q7Z3V5 609 aaPredicted RBP19.26■□□□□ 0.67
ERBB2-205ENST00000578199 IRF2BP2Q7Z5L9 587 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 BANK1Q8NDB2 785 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 SPAG5Q96R06 1193 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 PLEKHA4Q9H4M7 779 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 FAN1Q9Y2M0 1017 aa19.26■□□□□ 0.67
ERBB2-205ENST00000578199 TUBBP07437 444 aa19.25■□□□□ 0.67
ERBB2-205ENST00000578199 PTPROQ16827 1216 aa19.25■□□□□ 0.67
ERBB2-205ENST00000578199 CCDC181Q5TID7 509 aa19.25■□□□□ 0.67
ERBB2-205ENST00000578199 MAEAQ7L5Y9 396 aa19.25■□□□□ 0.67
ERBB2-205ENST00000578199 SLC35C1Q96A29 364 aa19.25■□□□□ 0.67
ERBB2-205ENST00000578199 ZMYM2Q9UBW7 1377 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms