RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ATP9AO75110 1047 aa30.57■■■□□ 2.48
LIMD2-203ENST00000578067 L3MBTL3Q96JM7 780 aaPredicted RBP30.57■■■□□ 2.48
LIMD2-203ENST00000578067 SIK3Q9Y2K2 1263 aa30.57■■■□□ 2.48
LIMD2-203ENST00000578067 CALUO43852 315 aaPredicted RBP30.56■■■□□ 2.48
LIMD2-203ENST00000578067 GUCY2CP25092 1073 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 QARSP47897 775 aaKnown RBP30.56■■■□□ 2.48
LIMD2-203ENST00000578067 ZNF131P52739 623 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 ZBED6P86452 979 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 TREML2Q5T2D2 321 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 USP50Q70EL3 339 aaPredicted RBP30.56■■■□□ 2.48
LIMD2-203ENST00000578067 NLRX1Q86UT6 975 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 GPRASP2Q96D09 838 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 A1CFQ9NQ94 594 aaKnown RBP30.56■■■□□ 2.48
LIMD2-203ENST00000578067 AGPAT5Q9NUQ2 364 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 EIF3DO15371 548 aaKnown RBP eCLIP30.56■■■□□ 2.48
LIMD2-203ENST00000578067 MAFGO15525 162 aa30.56■■■□□ 2.48
LIMD2-203ENST00000578067 TYW1Q9NV66 732 aaKnown RBP30.56■■■□□ 2.48
LIMD2-203ENST00000578067 LYPLA2O95372 231 aa30.55■■■□□ 2.48
LIMD2-203ENST00000578067 NR2F2P24468 414 aa30.55■■■□□ 2.48
LIMD2-203ENST00000578067 JAK3P52333 1124 aa30.55■■■□□ 2.48
LIMD2-203ENST00000578067 DBR1Q9UK59 544 aaKnown RBP30.55■■■□□ 2.48
LIMD2-203ENST00000578067 PHLPP2Q6ZVD8 1323 aa30.55■■■□□ 2.48
LIMD2-203ENST00000578067 UTRNP46939 3433 aa30.55■■■□□ 2.48
LIMD2-203ENST00000578067 SFNP31947 248 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 NF2P35240 595 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 KRT76Q01546 638 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 TRIM59Q8IWR1 403 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 ZNF397Q8NF99 534 aaPredicted RBP30.54■■■□□ 2.48
LIMD2-203ENST00000578067 INPP4AQ96PE3 977 aaPredicted RBP30.54■■■□□ 2.48
LIMD2-203ENST00000578067 TCEAL9Q9UHQ7 104 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 OTOFQ9HC10 1997 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 ERCC3P19447 782 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 PPATQ06203 517 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 ZC3H15Q8WU90 426 aaKnown RBP30.54■■■□□ 2.48
LIMD2-203ENST00000578067 CHP1Q99653 195 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 ELP3Q9H9T3 547 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 DNAI1Q9UI46 699 aa30.54■■■□□ 2.48
LIMD2-203ENST00000578067 LOXHD1Q8IVV2 1947 aa30.53■■■□□ 2.48
LIMD2-203ENST00000578067 MEA1Q16626 185 aa30.53■■■□□ 2.48
LIMD2-203ENST00000578067 PADI6Q6TGC4 694 aa30.53■■■□□ 2.48
LIMD2-203ENST00000578067 CHST13Q8NET6 341 aa30.53■■■□□ 2.48
LIMD2-203ENST00000578067 CDCA5Q96FF9 252 aa30.53■■■□□ 2.48
LIMD2-203ENST00000578067 WDR64B1ANS9 1081 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 NMT1P30419 496 aaKnown RBP30.52■■■□□ 2.48
LIMD2-203ENST00000578067 WDR59Q6PJI9 974 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 LBX2Q6XYB7 198 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 ZNHIT6Q9NWK9 470 aaKnown RBP30.52■■■□□ 2.48
LIMD2-203ENST00000578067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.52■■■□□ 2.48
LIMD2-203ENST00000578067 EPHX2P34913 555 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 ERO1BQ86YB8 467 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 ANKRD13AQ8IZ07 590 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 FIZ1Q96SL8 496 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 MMRN2Q9H8L6 949 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 FAM184BQ9ULE4 1060 aa30.52■■■□□ 2.48
LIMD2-203ENST00000578067 CCNE2O96020 404 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 GADL1Q6ZQY3 521 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 STXBP4Q6ZWJ1 553 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 ZNF720Q7Z2F6 126 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 FAM178BQ8IXR5 827 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 C4orf19Q8IY42 314 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 PROCA1Q8NCQ7 364 aaPredicted RBP30.51■■■□□ 2.47
LIMD2-203ENST00000578067 RDM1Q8NG50 284 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 ASTN1O14525 1302 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 IRF6O14896 467 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 HIP1RO75146 1068 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 STAM2O75886 525 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 UBE4BO95155 1302 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 PTPRFP10586 1907 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 RPL13P26373 211 aaKnown RBP30.51■■■□□ 2.47
LIMD2-203ENST00000578067 ODR4Q5SWX8 454 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 FRMD5Q7Z6J6 570 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 OTUD5Q96G74 571 aa30.51■■■□□ 2.47
LIMD2-203ENST00000578067 A0A0G2JLL6 359 aaPredicted RBP30.5■■■□□ 2.47
LIMD2-203ENST00000578067 RARRES1P49788 294 aa30.5■■■□□ 2.47
LIMD2-203ENST00000578067 PSMC5P62195 406 aa30.5■■■□□ 2.47
LIMD2-203ENST00000578067 KCNA1Q09470 495 aa30.5■■■□□ 2.47
LIMD2-203ENST00000578067 ZNF746Q6NUN9 644 aaPredicted RBP30.5■■■□□ 2.47
LIMD2-203ENST00000578067 PRRT2Q7Z6L0 340 aaPredicted RBP30.5■■■□□ 2.47
LIMD2-203ENST00000578067 SENP7Q9BQF6 1050 aa30.5■■■□□ 2.47
LIMD2-203ENST00000578067 FAM207AQ9NSI2 230 aaPredicted RBP30.5■■■□□ 2.47
LIMD2-203ENST00000578067 EPN1Q9Y6I3 576 aaPredicted RBP30.5■■■□□ 2.47
LIMD2-203ENST00000578067 CTIFO43310 598 aaKnown RBP30.49■■■□□ 2.47
LIMD2-203ENST00000578067 NR3C1P04150 777 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 YWHABP31946 246 aaKnown RBP30.49■■■□□ 2.47
LIMD2-203ENST00000578067 MAPK7Q13164 816 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 ACRBPQ8NEB7 543 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 CLMNQ96JQ2 1002 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 CXCL11O14625 94 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 RGS20O76081 388 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 UGCGQ16739 394 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 ZC2HC1CQ53FD0 456 aaPredicted RBP30.49■■■□□ 2.47
LIMD2-203ENST00000578067 DAW1Q8N136 415 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 SMCR8Q8TEV9 937 aaPredicted RBP30.49■■■□□ 2.47
LIMD2-203ENST00000578067 CDHR1Q96JP9 859 aa30.49■■■□□ 2.47
LIMD2-203ENST00000578067 SPDYE5A6NIY4 337 aa30.48■■■□□ 2.47
LIMD2-203ENST00000578067 TGFB1I1O43294 461 aa30.48■■■□□ 2.47
LIMD2-203ENST00000578067 NDUFA10O95299 355 aa30.48■■■□□ 2.47
LIMD2-203ENST00000578067 GNG11P61952 73 aa30.48■■■□□ 2.47
LIMD2-203ENST00000578067 KCNMA1Q12791 1236 aa30.48■■■□□ 2.47
LIMD2-203ENST00000578067 CCDC155Q8N6L0 562 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms