RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 CTAGE1Q96RT6 745 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 PIGSQ96S52 555 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
SS18-207ENST00000577636 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
SS18-207ENST00000577636 ESYT2A0FGR8 921 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 FSD2A1L4K1 749 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 PRR33A8MZF0 331 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 H3BQ06 376 aaPredicted RBP11.46□□□□□ -0.57
SS18-207ENST00000577636 STXBP3O00186 592 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 ZBTB5O15062 677 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 CYTH3O43739 400 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 UPP2O95045 317 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 PARNO95453 639 aaKnown RBP11.46□□□□□ -0.57
SS18-207ENST00000577636 CXCL10P02778 98 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 LIG1P18858 919 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 CMA1P23946 247 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 ARHGAP1Q07960 439 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 MFSD10Q14728 455 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 STXBP2Q15833 593 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 TTC38Q5R3I4 469 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 ARHGEF16Q5VV41 709 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 SASS6Q6UVJ0 657 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 DHX37Q8IY37 1157 aaKnown RBP11.46□□□□□ -0.57
SS18-207ENST00000577636 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
SS18-207ENST00000577636 PNMA2Q9UL42 364 aa11.46□□□□□ -0.57
SS18-207ENST00000577636 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.58
SS18-207ENST00000577636 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 LCTP09848 1927 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 EFCAB14O75071 495 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 ALADP13716 330 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
SS18-207ENST00000577636 MARCKSP29966 332 aaPredicted RBP11.45□□□□□ -0.58
SS18-207ENST00000577636 ADCY7P51828 1080 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 KIAA0753Q2KHM9 967 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 SESTD1Q86VW0 696 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 REXO1Q8N1G1 1221 aaKnown RBP11.45□□□□□ -0.58
SS18-207ENST00000577636 DBF4BQ8NFT6 615 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 SYTL5Q8TDW5 730 aaPredicted RBP11.45□□□□□ -0.58
SS18-207ENST00000577636 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
SS18-207ENST00000577636 WNT8BQ93098 351 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 KATNAL1Q9BW62 490 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 JMJD4Q9H9V9 463 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 MRVI1Q9Y6F6 885 aa11.45□□□□□ -0.58
SS18-207ENST00000577636 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
SS18-207ENST00000577636 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 NR1I2O75469 434 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 LGR5O75473 907 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 AMHP03971 560 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 MYCLP12524 364 aaPredicted RBP11.44□□□□□ -0.58
SS18-207ENST00000577636 THPOP40225 353 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 PTK7Q13308 1070 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
SS18-207ENST00000577636 PTPAQ15257 358 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 CDC37Q16543 378 aaPredicted RBP11.44□□□□□ -0.58
SS18-207ENST00000577636 CAMK4Q16566 473 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 PTPROQ16827 1216 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
SS18-207ENST00000577636 CUL5Q93034 780 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 COL20A1Q9P218 1284 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
SS18-207ENST00000577636 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
SS18-207ENST00000577636 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 CSPG5O95196 566 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 CAVIN2O95810 425 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 CFBP00751 764 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 TOB1P50616 345 aaPredicted RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 C1QBPQ07021 282 aaKnown RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 ORC2Q13416 577 aaPredicted RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 GPM6BQ13491 265 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 LAMC2Q13753 1193 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 TNFRSF25Q93038 417 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 MRPL38Q96DV4 380 aaKnown RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
SS18-207ENST00000577636 IWS1Q96ST2 819 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
SS18-207ENST00000577636 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms