RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 HELLSQ9NRZ9 838 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 TOMM22Q9NS69 142 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 FBXO40Q9UH90 709 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 DCTN4Q9UJW0 460 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 ANAPC4Q9UJX5 808 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 SYNPO2Q9UMS6 1093 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 COL6A3P12111 3177 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 ORC4O43929 436 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 IGHDP01880 384 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 ARAFP10398 606 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 HSPD1P10809 573 aaKnown RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 ADH6P28332 368 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 NOVP48745 357 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 CDK7P50613 346 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 GJA9P57773 515 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 TNFAIP2Q03169 654 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 HDAC1Q13547 482 aaPredicted RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 ALX1Q15699 326 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 MCMDC2Q4G0Z9 681 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 FAM109BQ6ICB4 259 aaPredicted RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 LYPD4Q6UWN0 246 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 NSMFQ6X4W1 530 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 C1orf229Q6ZS94 237 aaPredicted RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 NOL8Q76FK4 1167 aaKnown RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 FCHSD1Q86WN1 690 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 TBC1D10CQ8IV04 446 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 RILPL2Q969X0 211 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 RNPC3Q96LT9 517 aaKnown RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 CDX2Q99626 313 aaPredicted RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 UPF3AQ9H1J1 476 aaKnown RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 TTYH1Q9H313 450 aaPredicted RBP7.33□□□□□ -1.24
NUP88-212ENST00000576708 SEMA6BQ9H3T3 888 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 ABHD16BQ9H3Z7 469 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 CYP39A1Q9NYL5 469 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 CCPG1Q9ULG6 757 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 MCM3APO60318 1980 aa7.33□□□□□ -1.24
NUP88-212ENST00000576708 ARVCFO00192 962 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 DYNC1LI2O43237 492 aaPredicted RBP7.32□□□□□ -1.24
NUP88-212ENST00000576708 PLA2G6O60733 806 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 RPLP1P05386 114 aaKnown RBP7.32□□□□□ -1.24
NUP88-212ENST00000576708 FGRP09769 529 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 ACRP10323 421 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 CST5P28325 142 aaPredicted RBP7.32□□□□□ -1.24
NUP88-212ENST00000576708 FPGSQ05932 587 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 BAATQ14032 418 aaPredicted RBP7.32□□□□□ -1.24
NUP88-212ENST00000576708 TKFCQ3LXA3 575 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 TAPT1Q6NXT6 567 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 CXCL17Q6UXB2 119 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 C16orf59Q7L2K0 433 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 ANKRD33Q7Z3H0 272 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 TMC7Q7Z402 723 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 EXOC6Q8TAG9 804 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 PPP1R13LQ8WUF5 828 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 DCAF4Q8WV16 495 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 GLT1D1Q96MS3 346 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 ZKSCAN3Q9BRR0 538 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 RANBP17Q9H2T7 1088 aaKnown RBP7.32□□□□□ -1.24
NUP88-212ENST00000576708 CPVLQ9H3G5 476 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 C11orf16Q9NQ32 467 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 CNTN3Q9P232 1028 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 FOXD3Q9UJU5 478 aaPredicted RBP7.32□□□□□ -1.24
NUP88-212ENST00000576708 TBX21Q9UL17 535 aa7.32□□□□□ -1.24
NUP88-212ENST00000576708 GRIN2DO15399 1336 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 ELP1O95163 1332 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 UMODL1Q5DID0 1318 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 CCDC171Q6TFL3 1326 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 A0A0U1RQG5 324 aaPredicted RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 ASB14A6NK59 587 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 GRXCR1A8MXD5 290 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 RBAK-RBAKDNI3L0D1 243 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 NFIBO00712 420 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 GPR182O15218 404 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 TIMP1P01033 207 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 GOLGA8HP0CJ92 632 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 TOP1P11387 765 aaKnown RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 CSF2RAP15509 400 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 SDSP20132 328 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 CYP2C18P33260 490 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 PSMC6P62333 389 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 TMCO4Q5TGY1 634 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 SYDE2Q5VT97 1194 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 TTC39BQ5VTQ0 682 aaPredicted RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 PDE12Q6L8Q7 609 aaKnown RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 BTNL9Q6UXG8 535 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 SLC30A10Q6XR72 485 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 HFE2Q6ZVN8 426 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 DHX32Q7L7V1 743 aaKnown RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 TLK2Q86UE8 772 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 GOLGA6L1Q8N7Z2 621 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 PCSK9Q8NBP7 692 aaKnown RBP7.31□□□□□ -1.24
NUP88-212ENST00000576708 GALNT6Q8NCL4 622 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 CLEC4DQ8WXI8 215 aa7.31□□□□□ -1.24
NUP88-212ENST00000576708 TOX2Q96NM4 488 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms