RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 UBIAD1Q9Y5Z9 338 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 LOXHD1Q8IVV2 1947 aa13.34□□□□□ -0.27
CTDNEP1-212ENST00000576613 TECTAO75443 2155 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 CCDC69A6NI79 296 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 LOC730098B7Z3J9 87 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 ANTXR2P58335 489 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 UBE3AQ05086 875 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 TTC22Q5TAA0 569 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 RBM23Q86U06 439 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 RTN4RL1Q86UN2 441 aaPredicted RBP13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 NME8Q8N427 588 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 SDF4Q9BRK5 362 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 CELF4Q9BZC1 486 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 TLE6Q9H808 572 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
CTDNEP1-212ENST00000576613 SMIM35A0A1B0GVV1 85 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PLEKHA8P1O95397 391 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 CALM1P0DP23 149 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 CALM2P0DP24 149 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 CALM3P0DP25 149 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 CHMLP26374 656 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 SLC26A2P50443 739 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 ZXDAP98168 799 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 KRT76Q01546 638 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 CBX2Q14781 532 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 UBE2SQ16763 222 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PLPPR4Q7Z2D5 763 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 MICAL1Q8TDZ2 1067 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 ZBTB10Q96DT7 871 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 BARX2Q9UMQ3 279 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 USP15Q9Y4E8 981 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
CTDNEP1-212ENST00000576613 PRC1O43663 620 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 PPFIA3O75145 1194 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 GLP2RO95838 553 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 SRGAP2BP0DMP2 458 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 IBSPP21815 317 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 MCM5P33992 734 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 SARSP49591 514 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 STAT5BP51692 787 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 ACTR2P61160 394 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 NFX1Q12986 1120 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 ODR4Q5SWX8 454 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 PDE12Q6L8Q7 609 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 PRSS33Q8NF86 280 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 PCYT2Q99447 389 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 CDCA3Q99618 268 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 TLR9Q9NR96 1032 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 KCNH7Q9NS40 1196 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 NFASCO94856 1347 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 KMT2EQ8IZD2 1858 aa13.31□□□□□ -0.28
CTDNEP1-212ENST00000576613 USP34Q70CQ2 3546 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 FNDC1Q4ZHG4 1894 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 SGSM2O43147 1006 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 GATMP50440 423 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 PLCB4Q15147 1175 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 HEATR3Q7Z4Q2 680 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 MAP4K1Q92918 833 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 RPGRIP1Q96KN7 1286 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 TMX1Q9H3N1 280 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 GINS2Q9Y248 185 aa13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
CTDNEP1-212ENST00000576613 SH2B2O14492 632 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 ST18O60284 1047 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 RPS6KA5O75582 802 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 FGF18O76093 207 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 PDE4AP27815 886 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 LIFRP42702 1097 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 TMEM266Q2M3C6 531 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 IER5LQ5T953 404 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 TEX2Q8IWB9 1127 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 THNSL1Q8IYQ7 743 aa13.29□□□□□ -0.28
CTDNEP1-212ENST00000576613 EXOC6Q8TAG9 804 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms