RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 AGO4Q9HCK5 861 aaKnown RBP15.6■□□□□ 0.09
CCDC40-216ENST00000576241 TMEM260Q9NX78 707 aa15.6■□□□□ 0.09
CCDC40-216ENST00000576241 SNX14Q9Y5W7 946 aa15.6■□□□□ 0.09
CCDC40-216ENST00000576241 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-216ENST00000576241 M0QZ92 97 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 MEIS1O00470 390 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 GFRA3O60609 400 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 INSRRP14616 1297 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 PSMA5P28066 241 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 CLK2P49760 499 aaKnown RBP15.59■□□□□ 0.09
CCDC40-216ENST00000576241 STAT5BP51692 787 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 AKAP17AQ02040 695 aaKnown RBP15.59■□□□□ 0.09
CCDC40-216ENST00000576241 MGAT3Q09327 533 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 LPIN1Q14693 890 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 PUS10Q3MIT2 529 aaKnown RBP15.59■□□□□ 0.09
CCDC40-216ENST00000576241 MARCH8Q5T0T0 291 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 PLPPR4Q7Z2D5 763 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 PCYT2Q99447 389 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 C6orf50Q9HD87 102 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
CCDC40-216ENST00000576241 TECTAO75443 2155 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 H3BQ06 376 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-216ENST00000576241 RPS6KB1P23443 525 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 SLC26A2P50443 739 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 MRPS6P82932 125 aaKnown RBP15.58■□□□□ 0.08
CCDC40-216ENST00000576241 ZP2Q05996 745 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 ITGB3BPQ13352 177 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-216ENST00000576241 IER5Q5VY09 327 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 TSHZ1Q6ZSZ6 1077 aa15.58■□□□□ 0.08
CCDC40-216ENST00000576241 REXO1Q8N1G1 1221 aaKnown RBP15.58■□□□□ 0.08
CCDC40-216ENST00000576241 FAM49AQ9H0Q0 323 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-216ENST00000576241 MICAL3Q7RTP6 2002 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 DDX39AO00148 427 aaKnown RBP15.57■□□□□ 0.08
CCDC40-216ENST00000576241 BACH1O14867 736 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 GNA11P29992 359 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 PLCB4Q15147 1175 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 PTPROQ16827 1216 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 FBXO47Q5MNV8 452 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 FAM160B1Q5W0V3 765 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 PLA2G4DQ86XP0 818 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 NEK9Q8TD19 979 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 IL17RAQ96F46 866 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 ZMYND12Q9H0C1 365 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 TCEAL9Q9UHQ7 104 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 NID2Q14112 1375 aa15.57■□□□□ 0.08
CCDC40-216ENST00000576241 PTPRZ1P23471 2315 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-216ENST00000576241 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 FAM86B1E9PN63 330 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 IPO5O00410 1097 aaKnown RBP15.56■□□□□ 0.08
CCDC40-216ENST00000576241 PRPF3O43395 683 aaKnown RBP15.56■□□□□ 0.08
CCDC40-216ENST00000576241 ATG7O95352 703 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 FAM86B2P0C5J1 330 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 SETQ01105 290 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-216ENST00000576241 TCF15Q12870 199 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 MIS18BP1Q6P0N0 1132 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 TMEM192Q8IY95 271 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 FBXL16Q8N461 479 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 BICD2Q8TD16 824 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 TRAPPC12Q8WVT3 735 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 PHKBQ93100 1093 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 ZBTB10Q96DT7 871 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 MRPL38Q96DV4 380 aaKnown RBP15.56■□□□□ 0.08
CCDC40-216ENST00000576241 FAM86C1Q9NVL1 165 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 TRPV2Q9Y5S1 764 aa15.56■□□□□ 0.08
CCDC40-216ENST00000576241 SIP14410 1827 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 COL4A6Q14031 1691 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 CCNE2O96020 404 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 CYP3A4P08684 503 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 IRS1P35568 1242 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 PKN1Q16512 942 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 PDXDC2PQ6P474 469 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 NME8Q8N427 588 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 FIBCD1Q8N539 461 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 ZNF577Q9BSK1 485 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 RNF26Q9BY78 433 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-216ENST00000576241 AGXT2Q9BYV1 514 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 UPF3BQ9BZI7 483 aaKnown RBP15.55■□□□□ 0.08
CCDC40-216ENST00000576241 TBC1D22BQ9NU19 505 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 MUTYHQ9UIF7 546 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 SQORQ9Y6N5 450 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 C5orf42Q9H799 3197 aa15.55■□□□□ 0.08
CCDC40-216ENST00000576241 ADGRA3Q8IWK6 1321 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 IGLV3-22A0A075B6J6 115 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 IGKV6D-21A0A0A0MT36 114 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 SMIM35A0A1B0GVV1 85 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 H3BNC9 293 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 ENPP3O14638 875 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 HBP1O60381 514 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 CD52P31358 61 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 CTNNB1P35222 781 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 TMEM62Q0P6H9 643 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 PAK2Q13177 524 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 GPM6BQ13491 265 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 TIGD5Q53EQ6 642 aa15.54■□□□□ 0.08
CCDC40-216ENST00000576241 MTHFD1LQ6UB35 978 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms