RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DUSP10Q9Y6W6 482 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 HECW2Q9P2P5 1572 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 INHBAP08476 426 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 CD19P15391 556 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 CASC4Q6P4E1 433 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 TGS1Q96RS0 853 aaKnown RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 TULP2O00295 520 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 NMT2O60551 498 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 TFRCP02786 760 aaKnown RBP14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 KLK7P49862 253 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 DNAJC7Q99615 494 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 FAF1Q9UNN5 650 aaPredicted RBP14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 TTI1O43156 1089 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 STK4Q13043 487 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 TRPC3Q13507 836 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 NUDCD1Q96RS6 583 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 VCPKMTQ9H867 229 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 DNAJC12Q9UKB3 198 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 CHRNA3P32297 505 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 BTDP43251 543 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 COASYQ13057 564 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 CRYMQ14894 314 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 DDX42Q86XP3 938 aaKnown RBP eCLIP14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 RAD54LQ92698 747 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 HPS3Q969F9 1004 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 NT5C1BQ96P26 610 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 PRMT1Q99873 361 aaKnown RBP14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 NOD2Q9HC29 1040 aa14.15□□□□□ -0.14
PCDHGB3-201ENST00000576222 GYG2O15488 501 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 CYP27B1O15528 508 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 MFSD14BQ5SR56 506 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 CDKAL1Q5VV42 579 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 SYNE4Q8N205 404 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 GIMAP8Q8ND71 665 aaPredicted RBP14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 KAZALD1Q96I82 304 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 ISCUQ9H1K1 167 aa14.15□□□□□ -0.15
PCDHGB3-201ENST00000576222 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 A0A1W2PQJ5 194 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 AGTP01019 485 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 YWHAGP61981 247 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 PTK2Q05397 1052 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 TBC1D22AQ8WUA7 517 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 MXD3Q9BW11 206 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 ARL2BPQ9Y2Y0 163 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 COMMD10Q9Y6G5 202 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 TCP11X1B4DZS4 312 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 AARSP49588 968 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 EZH2Q15910 746 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 SPATA21Q7Z572 469 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 FOSP01100 380 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 GPATCH4Q5T3I0 446 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 SYT2Q8N9I0 419 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 DONSONQ9NYP3 566 aa14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 USP15Q9Y4E8 981 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB3-201ENST00000576222 SGK1O00141 431 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 MT-ND3P03897 115 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 CCND1P24385 295 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 PDE6BP35913 854 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 IL6STP40189 918 aaPredicted RBP14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 CNBD1Q8NA66 436 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 CENPKQ9BS16 269 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 TMEM60Q9H2L4 133 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 PLAGL2Q9UPG8 496 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 PRLRP16471 622 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 PDE1CQ14123 709 aaPredicted RBP14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 DHX34Q14147 1143 aaKnown RBP14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 DIXDC1Q155Q3 683 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 UBE2SQ16763 222 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 AOC3Q16853 763 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 FBXO11Q86XK2 927 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 USP38Q8NB14 1042 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 NSMCE1Q8WV22 266 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 HOOK2Q96ED9 719 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 ERGIC2Q96RQ1 377 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 KANSL2Q9H9L4 492 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 CAPN6Q9Y6Q1 641 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 CPS1P31327 1500 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 A0A0G2JND7 137 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 GNPATO15228 680 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 HSPA9P38646 679 aaKnown RBP14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 HERVK_113P62684 666 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 TRIM42Q8IWZ5 723 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 ST13P4Q8IZP2 240 aaPredicted RBP14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 GRAMD1AQ96CP6 724 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 ZFP69BQ9UJL9 534 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 CYP2D6P10635 497 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 HSD17B3P37058 310 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 MECOMQ03112 1051 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 C3orf20Q8ND61 904 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms