RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 BAG4O95429 457 aaKnown RBP8.9□□□□□ -0.98
CCDC40-215ENST00000576033 OR52Z1P0C646 297 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 ACRP10323 421 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 PDIA4P13667 645 aaKnown RBP8.9□□□□□ -0.98
CCDC40-215ENST00000576033 INSRRP14616 1297 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 TECP42680 631 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 STAT5BP51692 787 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 KRT76Q01546 638 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 PTGDRQ13258 359 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 PPP2R5CQ13362 524 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 DRP2Q13474 957 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 MBTPS1Q14703 1052 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 GRIK4Q16099 956 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 TRIM71Q2Q1W2 868 aaKnown RBP8.9□□□□□ -0.98
CCDC40-215ENST00000576033 MIS18BP1Q6P0N0 1132 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 PDXDC2PQ6P474 469 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 NFRKBQ6P4R8 1299 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 TRAF7Q6Q0C0 670 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 LRRC15Q8TF66 581 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 RIT2Q99578 217 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 LXNQ9BS40 222 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 NOC4LQ9BVI4 516 aaKnown RBP8.9□□□□□ -0.98
CCDC40-215ENST00000576033 TTC12Q9H892 705 aaPredicted RBP8.9□□□□□ -0.98
CCDC40-215ENST00000576033 KIF3AQ9Y496 699 aa8.9□□□□□ -0.98
CCDC40-215ENST00000576033 TCHHQ07283 1943 aa8.9□□□□□ -0.99
CCDC40-215ENST00000576033 CHD9Q3L8U1 2897 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 POTEB3A0JP26 581 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 KIAA0355O15063 1070 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 KPNA6O60684 536 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 OATP04181 439 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 PSAPP07602 524 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 CSF2RAP15509 400 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 PTMSP20962 102 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 ADAM17P78536 824 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 GPNMBQ14956 572 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 SF3A1Q15459 793 aaKnown RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 C9orf50Q5SZB4 431 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 POTEBQ6S5H4 581 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 POTEGQ6S5H5 508 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 SESTD1Q86VW0 696 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 CKAP2LQ8IYA6 745 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 LRRC71Q8N4P6 559 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 AFAP1L1Q8TED9 768 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 ATP6V0A1Q93050 837 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 USP28Q96RU2 1077 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 EIF2AK1Q9BQI3 630 aaKnown RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 KATNAL1Q9BW62 490 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 FAM49AQ9H0Q0 323 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 HIPK3Q9H422 1215 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 SMARCAD1Q9H4L7 1026 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 ERAP1Q9NZ08 941 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 SEPT9Q9UHD8 586 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 TCEAL9Q9UHQ7 104 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 ZNF215Q9UL58 517 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 NOL7Q9UMY1 257 aaKnown RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 PCDHA10Q9Y5I2 948 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 MAFBQ9Y5Q3 323 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-215ENST00000576033 EYSQ5T1H1 3165 aa8.89□□□□□ -0.99
CCDC40-215ENST00000576033 MROH7Q68CQ1 1323 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 MARCH6O60337 910 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 C22orf31O95567 290 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 F13A1P00488 732 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 SPATA31C1P0DKV0 1188 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 ZSCAN22P10073 491 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-215ENST00000576033 RAG1P15918 1043 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 MARCKSP29966 332 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-215ENST00000576033 CLCN3P51790 818 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 JAK3P52333 1124 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 NPEPPSP55786 919 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-215ENST00000576033 PTPAQ15257 358 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 MTERF2Q49AM1 385 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 SPECC1Q5M775 1068 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 ZNF618Q5T7W0 954 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 FAM160B1Q5W0V3 765 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 ANO5Q75V66 913 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 C16orf59Q7L2K0 433 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 PLPPR4Q7Z2D5 763 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 KCNK18Q7Z418 384 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 DEFB128Q7Z7B8 93 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 SERINC5Q86VE9 423 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 SMAP1Q8IYB5 467 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-215ENST00000576033 PIGOQ8TEQ8 1089 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 ATP8B4Q8TF62 1192 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 DNAJB3Q8WWF6 145 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 FAM20AQ96MK3 541 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 TOX2Q96NM4 488 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 CLIC6Q96NY7 704 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 CEP89Q96ST8 783 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 PLIN2Q99541 437 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 PCDHA12Q9UN75 941 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-215ENST00000576033 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 MICAL3Q7RTP6 2002 aa8.88□□□□□ -0.99
CCDC40-215ENST00000576033 VWA3AA6NCI4 1184 aa8.87□□□□□ -0.99
CCDC40-215ENST00000576033 TBX3O15119 743 aa8.87□□□□□ -0.99
CCDC40-215ENST00000576033 TLR3O15455 904 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms