RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
USP43-206ENST00000575346 PCDHA10Q9Y5I2 948 aa13.57□□□□□ -0.24
USP43-206ENST00000575346 PRUNE2Q8WUY3 3088 aa13.57□□□□□ -0.24
USP43-206ENST00000575346 CHD9Q3L8U1 2897 aa13.57□□□□□ -0.24
USP43-206ENST00000575346 BACH1O14867 736 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 AMHP03971 560 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 XBP1P17861 261 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 ATP4AP20648 1035 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 IGBP1P78318 339 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
USP43-206ENST00000575346 ZNF484Q5JVG2 852 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 FAM43BQ6ZT52 329 aaPredicted RBP13.56□□□□□ -0.24
USP43-206ENST00000575346 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 NME8Q8N427 588 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
USP43-206ENST00000575346 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 TOP1MTQ969P6 601 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 IFIH1Q9BYX4 1025 aaKnown RBP13.56□□□□□ -0.24
USP43-206ENST00000575346 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 WDR81Q562E7 1941 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
USP43-206ENST00000575346 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 WDR64B1ANS9 1081 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 PSMD10O75832 226 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 PSAPP07602 524 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 FDPSP14324 419 aaKnown RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 SFNP31947 248 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 NEK4P51957 841 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 MRPS6P82932 125 aaKnown RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 LPIN1Q14693 890 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 NONOQ15233 471 aaKnown RBP eCLIP13.55□□□□□ -0.24
USP43-206ENST00000575346 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 IER5Q5VY09 327 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 B3GNT9Q6UX72 402 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 TMCO2Q7Z6W1 182 aaPredicted RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 WASF1Q92558 559 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 ORC3Q9UBD5 711 aaPredicted RBP13.55□□□□□ -0.24
USP43-206ENST00000575346 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 INSL6Q9Y581 213 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 CDY2AQ9Y6F7 541 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
USP43-206ENST00000575346 LCHNA4D1U4 455 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 ZBTB42B2RXF5 422 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 GAS7O60861 476 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 LARGE1O95461 756 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 GHRP10912 638 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 KLRC1P26715 233 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 C8orf34Q49A92 452 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 MYOCDQ8IZQ8 938 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 TRAPPC12Q8WVT3 735 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 SYMPKQ92797 1274 aaKnown RBP13.54□□□□□ -0.24
USP43-206ENST00000575346 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 TEKT3Q9BXF9 490 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 PRDM6Q9NQX0 595 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 DISC1Q9NRI5 854 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 CEP131Q9UPN4 1083 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 TRPV2Q9Y5S1 764 aa13.54□□□□□ -0.24
USP43-206ENST00000575346 TDP2O95551 362 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 JAK3P52333 1124 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 ERVK-21P61565 698 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 INF2Q27J81 1249 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 LRCH2Q5VUJ6 765 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 PPP4R3AQ6IN85 833 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 NECAB1Q8N987 351 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
USP43-206ENST00000575346 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
USP43-206ENST00000575346 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
USP43-206ENST00000575346 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 MYO9BQ13459 2157 aa13.53□□□□□ -0.24
USP43-206ENST00000575346 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.24
USP43-206ENST00000575346 CCDC194A0A1B0GVG4 234 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 EPOPA6NHQ4 379 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 RBAK-RBAKDNI3L0D1 243 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 M0QZ92 97 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 ZNF862O60290 1169 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 LPXNO60711 386 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 C22orf31O95567 290 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
USP43-206ENST00000575346 NEK8Q86SG6 692 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.25
USP43-206ENST00000575346 FTHL17Q9BXU8 183 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 UNC45AQ9H3U1 944 aa13.52□□□□□ -0.25
USP43-206ENST00000575346 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms