RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 UBIAD1Q9Y5Z9 338 aa23.79■■□□□ 1.4
SPNS3-203ENST00000575185 PPFIA3O75145 1194 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 SCG2P13521 617 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 ZXDAP98168 799 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 NAALADL2Q58DX5 795 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 IER5Q5VY09 327 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 MB21D2Q8IYB1 491 aaPredicted RBP23.78■■□□□ 1.4
SPNS3-203ENST00000575185 CDHR1Q96JP9 859 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 FTHL17Q9BXU8 183 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 TMX1Q9H3N1 280 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 LY9Q9HBG7 655 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 SEC63Q9UGP8 760 aaKnown RBP23.78■■□□□ 1.4
SPNS3-203ENST00000575185 IGSF9BQ9UPX0 1349 aa23.78■■□□□ 1.4
SPNS3-203ENST00000575185 hCG_1642624A0A1W2PR95 340 aa23.77■■□□□ 1.4
SPNS3-203ENST00000575185 TCF15Q12870 199 aa23.77■■□□□ 1.4
SPNS3-203ENST00000575185 PAK2Q13177 524 aa23.77■■□□□ 1.4
SPNS3-203ENST00000575185 TMEM266Q2M3C6 531 aa23.77■■□□□ 1.4
SPNS3-203ENST00000575185 SRBD1Q8N5C6 995 aaKnown RBP23.77■■□□□ 1.4
SPNS3-203ENST00000575185 CTCFLQ8NI51 663 aaPredicted RBP23.77■■□□□ 1.4
SPNS3-203ENST00000575185 HCSTQ9UBK5 93 aa23.77■■□□□ 1.4
SPNS3-203ENST00000575185 TRPC6Q9Y210 931 aa23.77■■□□□ 1.4
SPNS3-203ENST00000575185 DMDP11532 3685 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 PER2O15055 1255 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 RXRAP19793 462 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 PDE4AP27815 886 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 PTPN5P54829 565 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 CBX2Q14781 532 aaPredicted RBP23.76■■□□□ 1.39
SPNS3-203ENST00000575185 VN1R2Q8NFZ6 395 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 RPGRIP1Q96KN7 1286 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 PSTPIP2Q9H939 334 aa23.76■■□□□ 1.39
SPNS3-203ENST00000575185 RRN3P2A6NIE6 340 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 M0QZ92 97 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 MGEA5O60502 916 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 DDAH1O94760 285 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 STAG3L1P0CL83 205 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 COL9A3Q14050 684 aaPredicted RBP23.75■■□□□ 1.39
SPNS3-203ENST00000575185 PLCB4Q15147 1175 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 TTC22Q5TAA0 569 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 SUGP1Q8IWZ8 645 aaKnown RBP23.75■■□□□ 1.39
SPNS3-203ENST00000575185 MAP3K14Q99558 947 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 CELF4Q9BZC1 486 aaKnown RBP23.75■■□□□ 1.39
SPNS3-203ENST00000575185 JPH1Q9HDC5 661 aaPredicted RBP23.75■■□□□ 1.39
SPNS3-203ENST00000575185 JADE2Q9NQC1 790 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 FAM86C1Q9NVL1 165 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 SQORQ9Y6N5 450 aa23.75■■□□□ 1.39
SPNS3-203ENST00000575185 EVPLQ92817 2033 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 KIF5BP33176 963 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 VCPP55072 806 aaKnown RBP23.74■■□□□ 1.39
SPNS3-203ENST00000575185 RAB11FIP4Q86YS3 637 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 FBXL6Q8N531 539 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 PHF7Q9BWX1 381 aaPredicted RBP23.74■■□□□ 1.39
SPNS3-203ENST00000575185 TLE6Q9H808 572 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 LRFN2Q9ULH4 789 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 PCDHA2Q9Y5H9 948 aa23.74■■□□□ 1.39
SPNS3-203ENST00000575185 CHMLP26374 656 aa23.73■■□□□ 1.39
SPNS3-203ENST00000575185 SNX27Q96L92 541 aa23.73■■□□□ 1.39
SPNS3-203ENST00000575185 AZI2Q9H6S1 392 aa23.73■■□□□ 1.39
SPNS3-203ENST00000575185 SLC9A2Q9UBY0 812 aa23.73■■□□□ 1.39
SPNS3-203ENST00000575185 PCDHA6Q9UN73 950 aa23.73■■□□□ 1.39
SPNS3-203ENST00000575185 PCDHA8Q9Y5H6 950 aa23.73■■□□□ 1.39
SPNS3-203ENST00000575185 SPDYE3A6NKU9 549 aa23.72■■□□□ 1.39
SPNS3-203ENST00000575185 RPLP2P05387 115 aaKnown RBP23.72■■□□□ 1.39
SPNS3-203ENST00000575185 SMARCA1P28370 1054 aa23.72■■□□□ 1.39
SPNS3-203ENST00000575185 SARSP49591 514 aaKnown RBP23.72■■□□□ 1.39
SPNS3-203ENST00000575185 KRT76Q01546 638 aa23.72■■□□□ 1.39
SPNS3-203ENST00000575185 NFX1Q12986 1120 aaKnown RBP23.72■■□□□ 1.39
SPNS3-203ENST00000575185 SPOUT1Q5T280 376 aaKnown RBP23.72■■□□□ 1.39
SPNS3-203ENST00000575185 CYP2W1Q8TAV3 490 aa23.72■■□□□ 1.39
SPNS3-203ENST00000575185 MICAL1Q8TDZ2 1067 aa23.72■■□□□ 1.39
SPNS3-203ENST00000575185 GINS2Q9Y248 185 aa23.72■■□□□ 1.39
SPNS3-203ENST00000575185 KDM3AQ9Y4C1 1321 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 ERVFC1P60507 584 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 ACTR2P61160 394 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 SIGLEC14Q08ET2 396 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 CCDC82Q8N4S0 544 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 ATP8B4Q8TF62 1192 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 SUSD6Q92537 303 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 ASIC4Q96FT7 647 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 CDHR5Q9HBB8 845 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 ERVK-5Q9HDB9 667 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 TLR9Q9NR96 1032 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 KCNH7Q9NS40 1196 aa23.71■■□□□ 1.39
SPNS3-203ENST00000575185 PLXNA3P51805 1871 aa23.7■■□□□ 1.39
SPNS3-203ENST00000575185 SMIM35A0A1B0GVV1 85 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 TBKBP1A7MCY6 615 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 PRC1O43663 620 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 DUSP6Q16828 381 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 FAM102BQ5T8I3 360 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 MTHFD1LQ6UB35 978 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 TMEM40Q8WWA1 233 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 PGBD1Q96JS3 809 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 LZTS2Q9BRK4 669 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 NOC2LQ9Y3T9 749 aaKnown RBP23.7■■□□□ 1.38
SPNS3-203ENST00000575185 ZFHX2Q9C0A1 2572 aaPredicted RBP23.7■■□□□ 1.38
SPNS3-203ENST00000575185 CACNA1HO95180 2353 aa23.7■■□□□ 1.38
SPNS3-203ENST00000575185 SH2B2O14492 632 aaPredicted RBP23.69■■□□□ 1.38
SPNS3-203ENST00000575185 FGF18O76093 207 aa23.69■■□□□ 1.38
SPNS3-203ENST00000575185 ARP10275 920 aa23.69■■□□□ 1.38
SPNS3-203ENST00000575185 SP100P23497 879 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms