RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ANKRD20A1Q5TYW2 823 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 ANKRD20A3Q5VUR7 823 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 CADPS2Q86UW7 1296 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 TPCN2Q8NHX9 752 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 RNF25Q96BH1 459 aaPredicted RBP15.68■□□□□ 0.1
SMG6-215ENST00000574501 KLHL29Q96CT2 875 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 BRIP1Q9BX63 1249 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 ZMYND12Q9H0C1 365 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 CPVLQ9H3G5 476 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 SLITRK6Q9H5Y7 841 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMG6-215ENST00000574501 UBR2Q8IWV8 1755 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 FGGP02679 453 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 PLTPP55058 493 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 LRRC14Q15048 493 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 MGARPQ8TDB4 240 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 SEC14L1Q92503 715 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
SMG6-215ENST00000574501 TXLNGYQ9BZA5 131 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 AIPL1Q9NZN9 384 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 PNMA3Q9UL41 463 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
SMG6-215ENST00000574501 STXBP3O00186 592 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 CYTH3O43739 400 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 GYG1P46976 350 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 PMS2P54278 862 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 FKBP3Q00688 224 aaKnown RBP15.67■□□□□ 0.1
SMG6-215ENST00000574501 PRPF4BQ13523 1007 aaKnown RBP15.67■□□□□ 0.1
SMG6-215ENST00000574501 BLMHQ13867 455 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 SLC29A2Q14542 456 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 SLMAPQ14BN4 828 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 DENND2CQ68D51 928 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 TRIM68Q6AZZ1 485 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 NELFCDQ8IXH7 590 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 DDX12PQ92771 950 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 GLG1Q92896 1179 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 ETAA1Q9NY74 926 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMG6-215ENST00000574501 TRPM3Q9HCF6 1732 aaPredicted RBP15.67■□□□□ 0.1
SMG6-215ENST00000574501 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 SNX3O60493 162 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 ATP2A2P16615 1042 aaKnown RBP15.67■□□□□ 0.1
SMG6-215ENST00000574501 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 EPS8L3Q8TE67 593 aaKnown RBP15.67■□□□□ 0.1
SMG6-215ENST00000574501 CNKSR1Q969H4 720 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 CDK5RAP3Q96JB5 506 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 PNMA5Q96PV4 448 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 FGFBP2Q9BYJ0 223 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 HOMER3Q9NSC5 361 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 NAGPAQ9UK23 515 aa15.67■□□□□ 0.1
SMG6-215ENST00000574501 MYH3P11055 1940 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 EPS15P42566 896 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 ALKBH5Q6P6C2 394 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 RASGEF1CQ8N431 466 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 NEK9Q8TD19 979 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 ZNF384Q8TF68 577 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 PABPC3Q9H361 631 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 BARHL2Q9NY43 387 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 ADAM22Q9P0K1 906 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 BTNL10A8MVZ5 291 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 SNUPNO95149 360 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 GOLGA8HP0CJ92 632 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 MSH2P43246 934 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 COPS2P61201 443 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 POU5F1Q01860 360 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 TAF11Q15544 211 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 IFI16Q16666 785 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 ARHGAP27Q6ZUM4 889 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 KCNK18Q7Z418 384 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 IRF2BP2Q7Z5L9 587 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 MYOCDQ8IZQ8 938 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 PGM2Q96G03 612 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 OSBPL1AQ9BXW6 950 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 NSRP1Q9H0G5 558 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 GANQ9H2C0 597 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 FGFR1OP2Q9NVK5 253 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 MAD2L2Q9UI95 211 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 DBR1Q9UK59 544 aaKnown RBP15.66■□□□□ 0.1
SMG6-215ENST00000574501 SNX24Q9Y343 169 aa15.66■□□□□ 0.1
SMG6-215ENST00000574501 ANKRD33BA6NCL7 494 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 CCDC169A6NNP5 214 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 MLXIPLQ9NP71 852 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 RIC8AQ9NPQ8 531 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 ZDHHC18Q9NUE0 388 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 USP15Q9Y4E8 981 aaPredicted RBP15.65■□□□□ 0.1
SMG6-215ENST00000574501 POTEMA6NI47 508 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 TCP11X1B4DZS4 312 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 IRF6O14896 467 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 NUDT17P0C025 328 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 DR1Q01658 176 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 RBBP5Q15291 538 aaKnown RBP15.65■□□□□ 0.1
SMG6-215ENST00000574501 GALNTL6Q49A17 601 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 FBXO25Q8TCJ0 367 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 DYDC1Q8WWB3 177 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 SEMA4AQ9H3S1 761 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 DLEC1Q9Y238 1755 aa15.65■□□□□ 0.1
SMG6-215ENST00000574501 XIRP1Q702N8 1843 aaKnown RBP15.64■□□□□ 0.09
SMG6-215ENST00000574501 A6NHS1 94 aa15.64■□□□□ 0.09
SMG6-215ENST00000574501 STARD3NLO95772 234 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms