RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 IFIH1Q9BYX4 1025 aaKnown RBP12.86□□□□□ -0.35
RPAIN-214ENST00000574003 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
RPAIN-214ENST00000574003 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
RPAIN-214ENST00000574003 RRN3P2A6NIE6 340 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 MSH4O15457 936 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 DEXIO95424 95 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 LARGE1O95461 756 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 TDP2O95551 362 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 CD52P31358 61 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 CIITAP33076 1130 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 AK2P54819 239 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 FBXO47Q5MNV8 452 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 MIS18BP1Q6P0N0 1132 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 RPAINQ86UA6 219 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 TBCKQ8TEA7 893 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 CDHR5Q9HBB8 845 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 PCDHA4Q9UN74 947 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
RPAIN-214ENST00000574003 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
RPAIN-214ENST00000574003 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 CHMP2AO43633 222 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 EFCAB14O75071 495 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 IBSPP21815 317 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-214ENST00000574003 KLRC1P26715 233 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 FOSBP53539 338 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 ERVK-21P61565 698 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 TFF2Q03403 129 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 SKIV2LQ15477 1246 aaKnown RBP12.84□□□□□ -0.35
RPAIN-214ENST00000574003 UGCGQ16739 394 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 BICD2Q8TD16 824 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 LINC01599Q8WXQ3 324 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 TGS1Q96RS0 853 aaKnown RBP12.84□□□□□ -0.35
RPAIN-214ENST00000574003 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-214ENST00000574003 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 GABBR1Q9UBS5 961 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 TRANK1O15050 2925 aa12.84□□□□□ -0.35
RPAIN-214ENST00000574003 M0R2N6 131 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 ENPP3O14638 875 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-214ENST00000574003 HBP1O60381 514 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 PFKFB2O60825 505 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-214ENST00000574003 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-214ENST00000574003 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 RTN4RL1Q86UN2 441 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-214ENST00000574003 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 ATP8B4Q8TF62 1192 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 YME1L1Q96TA2 773 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 UNC45AQ9H3U1 944 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 SAMM50Q9Y512 469 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 INSL6Q9Y581 213 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 TTC3P53804 2025 aa12.83□□□□□ -0.36
RPAIN-214ENST00000574003 SMIM35A0A1B0GVV1 85 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 ZNF862O60290 1169 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 ME3Q16798 604 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 INF2Q27J81 1249 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 MCTP2Q6DN12 878 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 ZNF746Q6NUN9 644 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-214ENST00000574003 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 KIAA0319LQ8IZA0 1049 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-214ENST00000574003 TMEM40Q8WWA1 233 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 APBB2Q92870 758 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
RPAIN-214ENST00000574003 ZNF668Q96K58 619 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-214ENST00000574003 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
RPAIN-214ENST00000574003 MAFBQ9Y5Q3 323 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-214ENST00000574003 NCOR1O75376 2440 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 TMEM150BA6NC51 233 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 SLC37A4O43826 429 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 GAS7O60861 476 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 CSPG5O95196 566 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 C22orf31O95567 290 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 VTNP04004 478 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 PSAPP07602 524 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 FDPSP14324 419 aaKnown RBP12.81□□□□□ -0.36
RPAIN-214ENST00000574003 POU3F3P20264 500 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-214ENST00000574003 GATMP50440 423 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 USP11P51784 963 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 KRT76Q01546 638 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
RPAIN-214ENST00000574003 EARS2Q5JPH6 523 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms