RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SERINC5Q86VE9 423 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 NOC4LQ9BVI4 516 aaKnown RBP14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 TUBE1Q9UJT0 475 aa14.33□□□□□ -0.12
TRAPPC1-206ENST00000573989 EVPLQ92817 2033 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 EML1O00423 815 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 TREHO43280 583 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 CAND2O75155 1236 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 MAGEA10P43363 369 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZNF200P98182 395 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 FPGSQ05932 587 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 SPIRE1Q08AE8 756 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 PPIGQ13427 754 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 PDIA5Q14554 519 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 ARL6IP4Q66PJ3 421 aaKnown RBP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 HAUS3Q68CZ6 603 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 DTHD1Q6ZMT9 781 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 OTUD6AQ7L8S5 288 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 TRMT1LQ7Z2T5 733 aaKnown RBP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 BANK1Q8NDB2 785 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 BADQ92934 168 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZSWIM4Q9H7M6 989 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 MYH15Q9Y2K3 1946 aa14.32□□□□□ -0.12
TRAPPC1-206ENST00000573989 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 MBLAC1A4D2B0 266 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 MAGEB2O15479 319 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 SELPP16109 830 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 CYP2C18P33260 490 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 RFC2P35250 354 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 THPOP40225 353 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 ADAM17P78536 824 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 ATP2C1P98194 919 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 RBL2Q08999 1139 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 RESTQ13127 1097 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 TPH2Q8IWU9 490 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 C4orf19Q8IY42 314 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 C4orf32Q8N8J7 132 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 CCDC43Q96MW1 224 aaKnown RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 EIF2AK1Q9BQI3 630 aaKnown RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 LXNQ9BS40 222 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 UBE2OQ9C0C9 1292 aaKnown RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 SEPT9Q9UHD8 586 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 PPME1Q9Y570 386 aa14.31□□□□□ -0.12
TRAPPC1-206ENST00000573989 POTEMA6NI47 508 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 DDX11L8A8MPP1 907 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZNF862O60290 1169 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 ZSCAN22P10073 491 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 CKBP12277 381 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 ATP4AP20648 1035 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 TMOD1P28289 359 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 BMP8BP34820 402 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 ANP32AP39687 249 aaKnown RBP14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 CCL23P55773 120 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 CYP4A11Q02928 519 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 UGCGQ16739 394 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 MTHFD1LQ6UB35 978 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 NME8Q8N427 588 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 GDF15Q99988 308 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 JPH2Q9BR39 696 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 NIFKQ9BYG3 293 aaKnown RBP14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 TUFT1Q9NNX1 390 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 PCDHA2Q9Y5H9 948 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 LOXHD1Q8IVV2 1947 aa14.3□□□□□ -0.12
TRAPPC1-206ENST00000573989 SMIM35A0A1B0GVV1 85 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 M0QZ92 97 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 SLITRK3O94933 977 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 PFKMP08237 780 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 IQCF3P0C7M6 154 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 MUTP22033 750 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 ITGB8P26012 769 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 KLRC1P26715 233 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 TBC1D8BQ0IIM8 1120 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 CTTNQ14247 550 aaKnown RBP14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 HIC1Q14526 733 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 SF3A1Q15459 793 aaKnown RBP14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 MARCH8Q5T0T0 291 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 IER5Q5VY09 327 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 RPAINQ86UA6 219 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 IGSF22Q8N9C0 903 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 TRAPPC12Q8WVT3 735 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 HSD17B14Q9BPX1 270 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 POLR3CQ9BUI4 534 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 RGL1Q9NZL6 768 aa14.29□□□□□ -0.12
TRAPPC1-206ENST00000573989 A0A1W2PPC1 479 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 RSPH10B2B2RC85 870 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 LYPLA2O95372 231 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 F13A1P00488 732 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 RSPH10BP0C881 870 aa14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 XRCC6P12956 609 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAPPC1-206ENST00000573989 CSF2RAP15509 400 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms