RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 CCNE2O96020 404 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 SLC26A2P50443 739 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 MGAT3Q09327 533 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 LPIN1Q14693 890 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 MARCH8Q5T0T0 291 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 IER5Q5VY09 327 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 TSHZ1Q6ZSZ6 1077 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 TRMT1LQ7Z2T5 733 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 RPAINQ86UA6 219 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 CCDC60Q8IWA6 550 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 C17orf80Q9BSJ5 609 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 PDRG1Q9NUG6 133 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 COL4A6Q14031 1691 aa10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 SPTBN5Q9NRC6 3674 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-212ENST00000573328 IGLV3-22A0A075B6J6 115 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 HBP1O60381 514 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 DEXIO95424 95 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 EVCP57679 992 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 ERVK-21P61565 698 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 HTRA4P83105 476 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 KRT76Q01546 638 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 PAK2Q13177 524 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 AAK1Q2M2I8 961 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 FBXO47Q5MNV8 452 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 SWSAP1Q6NVH7 229 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 ABHD15Q6UXT9 468 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 ATP8B4Q8TF62 1192 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 TOP1MTQ969P6 601 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 ASB2Q96Q27 587 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 TM6SF1Q9BZW5 370 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 GINS2Q9Y248 185 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 PCDHA2Q9Y5H9 948 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
NPLOC4-212ENST00000573328 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 COL1A2P08123 1366 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 CHMP2AO43633 222 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 LPXNO60711 386 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 CDKL5O76039 1030 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 ATG7O95352 703 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 PSAPP07602 524 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 POU3F3P20264 500 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 KLRC1P26715 233 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 CD52P31358 61 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 TFF2Q03403 129 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 ZNF746Q6NUN9 644 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 FIBCD1Q8N539 461 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 CRYGNQ8WXF5 182 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 ZNF274Q96GC6 653 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 C22orf23Q9BZE7 217 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
NPLOC4-212ENST00000573328 BRWD1Q9NSI6 2320 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 ADGRA3Q8IWK6 1321 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 IGKV6D-21A0A0A0MT36 114 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 SMIM35A0A1B0GVV1 85 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 WDR64B1ANS9 1081 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 DHX15O43143 795 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 GAS7O60861 476 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 CIITAP33076 1130 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 CTNNB1P35222 781 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 EPC2Q52LR7 807 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 ZNF484Q5JVG2 852 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 LRCH2Q5VUJ6 765 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 BLIDQ8IZY5 108 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 METTL13Q8N6R0 699 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 ADAMTS19Q8TE59 1207 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 TBCKQ8TEA7 893 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 BBXQ8WY36 941 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 IL17RAQ96F46 866 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 TEKT3Q9BXF9 490 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 FTHL17Q9BXU8 183 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 CELF4Q9BZC1 486 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 SLKQ9H2G2 1235 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 LMCD1Q9NZU5 365 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 GABBR1Q9UBS5 961 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 PCDHA4Q9UN74 947 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 COG5Q9UP83 839 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 PCDHA10Q9Y5I2 948 aa10.92□□□□□ -0.66
NPLOC4-212ENST00000573328 PLXNA4Q9HCM2 1894 aa10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 ARID2Q68CP9 1835 aa10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 IGSF9BQ9UPX0 1349 aa10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 CENPBP07199 599 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 XBP1P17861 261 aa10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 USP11P51784 963 aa10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 KCNQ1P51787 676 aa10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-212ENST00000573328 GPM6BQ13491 265 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms