RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 DEFB103AP81534 67 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 DPYDQ12882 1025 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 MBTPS1Q14703 1052 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 ARHGEF16Q5VV41 709 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 MB21D2Q8IYB1 491 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 CMTR1Q8N1G2 835 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 RETREG2Q8NC44 543 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 TPCN2Q8NHX9 752 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 NECAB3Q96P71 396 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 KRT23Q9C075 422 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
NPLOC4-210ENST00000572824 BDP1A6H8Y1 2624 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 HIP1O00291 1037 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 IFIT3O14879 490 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 ZBTB5O15062 677 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 SGSM2O43147 1006 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 NBNO60934 754 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 STAU1O95793 577 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 GH1P01241 217 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 TFF2Q03403 129 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 TROAPQ12815 778 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 PGM5Q15124 567 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 PTGISQ16647 500 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 HSDL1Q3SXM5 330 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 FCHSD1Q86WN1 690 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 TICAM2Q86XR7 235 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 HOMEZQ8IX15 550 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 RGS22Q8NE09 1264 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 AMNQ9BXJ7 453 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 LRRC2Q9BYS8 371 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 RAPGEFL1Q9UHV5 662 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 PCDHA1Q9Y5I3 950 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 MRVI1Q9Y6F6 885 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 SLC4A7Q9Y6M7 1214 aa10.71□□□□□ -0.69
NPLOC4-210ENST00000572824 RAD50Q92878 1312 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 LOC102724159A0A0B4J2E5 919 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 TMEM229AB2RXF0 380 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 NKRFO15226 690 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 GGPS1O95749 300 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 PTGIRP43119 386 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 AAMPQ13685 434 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 PWP2Q15269 919 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 STXBP2Q15833 593 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 TRIM71Q2Q1W2 868 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 NFRKBQ6P4R8 1299 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 LY9Q9HBG7 655 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 CTNNA3Q9UI47 895 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 MSRAQ9UJ68 235 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 MRPL11Q9Y3B7 192 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 RBM8AQ9Y5S9 174 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 KAT6AQ92794 2004 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 KIAA1671Q9BY89 1806 aa10.7□□□□□ -0.7
NPLOC4-210ENST00000572824 HAS3O00219 553 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 F2P00734 622 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 GDF10P55107 478 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 GHRHRQ02643 423 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 RAB30Q15771 203 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 KIAA0753Q2KHM9 967 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 TMEM67Q5HYA8 995 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 FAM117BQ6P1L5 589 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 USP17L6PQ6QN14 398 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 IGDCC4Q8TDY8 1250 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 GDPD5Q8WTR4 605 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 ZBTB10Q96DT7 871 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 TCEANC2Q96MN5 208 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 GAS2L1Q99501 681 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 FTOQ9C0B1 505 aaKnown RBP eCLIP10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 LSG1Q9H089 658 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 RIOX1Q9H6W3 641 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 CNNM2Q9H8M5 875 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 SLC28A3Q9HAS3 691 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 ETNK1Q9HBU6 452 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 GTF2IRD1Q9UHL9 959 aa10.69□□□□□ -0.7
NPLOC4-210ENST00000572824 SFI1A8K8P3 1242 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 LPXNO60711 386 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 CKBP12277 381 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 KCNQ1P51787 676 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 SEC13P55735 322 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 WDR5P61964 334 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 RELBQ01201 579 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 SP4Q02446 784 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 TAP1Q03518 808 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 WTAPQ15007 396 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 CCDC178Q5BJE1 867 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 ZNF618Q5T7W0 954 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 LRRC8DQ7L1W4 858 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 HERC6Q8IVU3 1022 aa10.68□□□□□ -0.7
NPLOC4-210ENST00000572824 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms