RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MRPS9P82933 396 aaKnown RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 SMAD3P84022 425 aaKnown RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 SP2Q02086 613 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 RTN1Q16799 776 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 GNPTABQ3T906 1256 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 TMEM240Q5SV17 173 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 FAM109BQ6ICB4 259 aaPredicted RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 BLOC1S2Q6QNY1 142 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 Q6ZUG5 572 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 ZNF365Q70YC5 407 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 Q7L0L9 218 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 RPUSD2Q8IZ73 545 aaKnown RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 PPP1R13LQ8WUF5 828 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 JAKMIP1Q96N16 626 aaKnown RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 IL23AQ9NPF7 189 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 TRMT13Q9NUP7 481 aaKnown RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 NAP1L2Q9ULW6 460 aaPredicted RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 MAFBQ9Y5Q3 323 aaPredicted RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 UMODL1Q5DID0 1318 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 CCDC196A0A1B0GTZ2 297 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 EPB41L2O43491 1005 aaKnown RBP8.53□□□□□ -1.04
NUP88-205ENST00000572809 SORBS3O60504 671 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 CYP2C9P11712 490 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 CPA1P15085 419 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
NUP88-205ENST00000572809 CDC27P30260 824 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 ICAM3P32942 547 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 ADD1P35611 737 aaKnown RBP8.53□□□□□ -1.04
NUP88-205ENST00000572809 RCAN1P53805 252 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 APOBRQ0VD83 1088 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 HSDL1Q3SXM5 330 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 PCNX4Q63HM2 1172 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 XRRA1Q6P2D8 792 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 PSRC1Q6PGN9 363 aaPredicted RBP8.53□□□□□ -1.04
NUP88-205ENST00000572809 HEATR3Q7Z4Q2 680 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 C7orf31Q8N865 590 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 PPTC7Q8NI37 304 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 KAT2BQ92831 832 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 SPATA33Q96N06 139 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 INPP4AQ96PE3 977 aaPredicted RBP8.53□□□□□ -1.04
NUP88-205ENST00000572809 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 NOC4LQ9BVI4 516 aaKnown RBP8.53□□□□□ -1.04
NUP88-205ENST00000572809 MTMR10Q9NXD2 777 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 USTQ9Y2C2 406 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 FRMPD4Q14CM0 1322 aa8.53□□□□□ -1.04
NUP88-205ENST00000572809 KIAA1217Q5T5P2 1943 aa8.52□□□□□ -1.04
NUP88-205ENST00000572809 SPDYE3A6NKU9 549 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 FIBPO43427 364 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 MAN1A2O60476 641 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 ATG7O95352 703 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 ADH1CP00326 375 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
NUP88-205ENST00000572809 UBA1P22314 1058 aaKnown RBP8.52□□□□□ -1.05
NUP88-205ENST00000572809 RPS6KB1P23443 525 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 METAP2P50579 478 aaKnown RBP eCLIP8.52□□□□□ -1.05
NUP88-205ENST00000572809 NEDD9Q14511 834 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 PTGISQ16647 500 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 UBE2SQ16763 222 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 KIAA0753Q2KHM9 967 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 CYFIP1Q7L576 1253 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 NLRX1Q86UT6 975 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 SESTD1Q86VW0 696 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 FBXL16Q8N461 479 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 BRF1Q92994 677 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 SCLYQ96I15 445 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 KATNAL1Q9BW62 490 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 USP26Q9BXU7 913 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 WNT8AQ9H1J5 351 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 HDAC6Q9UBN7 1215 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 PCDHA6Q9UN73 950 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 PCDHA8Q9Y5H6 950 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 CNTNAP5Q8WYK1 1306 aa8.52□□□□□ -1.05
NUP88-205ENST00000572809 MYH7BA7E2Y1 1941 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 SMCO2A6NFE2 343 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 hCG_1984214I3L0E3 225 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 HAS3O00219 553 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 NOP56O00567 594 aaKnown RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 MAFGO15525 162 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 IQCF3P0C7M6 154 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 ZNF286BP0CG31 522 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 SKIP12755 728 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 HOXD8P13378 290 aaPredicted RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 NAPAP54920 295 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 BFSP2Q13515 415 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 RASIP1Q5U651 963 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 WWC2Q6AWC2 1192 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 METTL7BQ6UX53 244 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms