RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 PTPN11Q06124 597 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 PPFIA1Q13136 1202 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 UGCGQ16739 394 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 ATP8B4Q8TF62 1192 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 BBXQ8WY36 941 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 CCDC43Q96MW1 224 aaKnown RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 SCAND2PQ9GZW5 306 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 TUFT1Q9NNX1 390 aa16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 SEPT9Q9UHD8 586 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 FBXO2Q9UK22 296 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-209ENST00000572760 GRIN2DO15399 1336 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 C17orf102A2RUQ5 167 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 DCDC2CA8MYV0 355 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 SLITRK3O94933 977 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 CDC25AP30304 524 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 TXLNAP40222 546 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 IGBP1P78318 339 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 TRIM60Q495X7 471 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 XKR3Q5GH77 459 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 CALML4Q96GE6 196 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 HSD17B14Q9BPX1 270 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 POLR3CQ9BUI4 534 aaPredicted RBP16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 GTF2IRD1Q9UHL9 959 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
NPLOC4-209ENST00000572760 NRCAMQ92823 1304 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 RRN3P2A6NIE6 340 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 PP2D1A8MPX8 630 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 ZNF862O60290 1169 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 CUTAO60888 179 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 MED24O75448 989 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 INSRRP14616 1297 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 ATP4AP20648 1035 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 RPA1P27694 616 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 TLE2Q04725 743 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 GRIN1Q05586 938 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 GRIK4Q16099 956 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 LRRC26Q2I0M4 334 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 ZNF484Q5JVG2 852 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 OTUD6AQ7L8S5 288 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 CABP7Q86V35 215 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 CATSPER3Q86XQ3 398 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 C4orf19Q8IY42 314 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 DPF3Q92784 378 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 SETD4Q9NVD3 440 aa16.24■□□□□ 0.19
NPLOC4-209ENST00000572760 KDM3AQ9Y4C1 1321 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 SPATA31C1P0DKV0 1188 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 CDK7P50613 346 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 SNX17Q15036 470 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 PTGISQ16647 500 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 MTERF2Q49AM1 385 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 SPECC1Q5M775 1068 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 C1orf53Q5VUE5 145 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 SESTD1Q86VW0 696 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 SLC43A3Q8NBI5 491 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 LEO1Q8WVC0 666 aaPredicted RBP16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 NACC1Q96RE7 527 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 KIAA1024Q9UPX6 916 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 MYH11P35749 1972 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 COL1A2P08123 1366 aa16.23■□□□□ 0.19
NPLOC4-209ENST00000572760 MUTP22033 750 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 CSPP1Q1MSJ5 1256 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 POTEGQ6S5H5 508 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 FAM126BQ8IXS8 530 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 TOX2Q96NM4 488 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 PLIN2Q99541 437 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 NT5C3AQ9H0P0 336 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 TRPV6Q9H1D0 765 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 TRMT13Q9NUP7 481 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 PCDHA7Q9UN72 937 aa16.22■□□□□ 0.19
NPLOC4-209ENST00000572760 A0A087WWV3 80 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 SLC26A4O43511 780 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 EVI5O60447 810 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 B4GALT4O60513 344 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 LYPLA2O95372 231 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 PLA2G4FQ68DD2 849 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 ANKRD33Q7Z3H0 272 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 ZNF579Q8NAF0 562 aaKnown RBP16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 PIGOQ8TEQ8 1089 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 TRAPPC12Q8WVT3 735 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 SYMPKQ92797 1274 aaKnown RBP16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms