RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 CASP10Q92851 521 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 NGRNQ9NPE2 291 aaKnown RBP11.72□□□□□ -0.53
CHMP6-203ENST00000572525 ERAP1Q9NZ08 941 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 MIA3Q5JRA6 1907 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.53
CHMP6-203ENST00000572525 RRN3P2A6NIE6 340 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 PER2O15055 1255 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
CHMP6-203ENST00000572525 SORBS3O60504 671 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 FGF18O76093 207 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 CSPG5O95196 566 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 AOC1P19801 751 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 CD52P31358 61 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 TECP42680 631 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 MTHFRP42898 656 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 GRIK4Q16099 956 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 CES5AQ6NT32 575 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 DGLUCYQ7Z3D6 616 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 DNAJB3Q8WWF6 145 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 TNPO1Q92973 898 aaKnown RBP11.71□□□□□ -0.53
CHMP6-203ENST00000572525 RMDN1Q96DB5 314 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 RTP3Q9BQQ7 232 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 ADAM7Q9H2U9 754 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 PADI3Q9ULW8 664 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
CHMP6-203ENST00000572525 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
CHMP6-203ENST00000572525 FAM208BQ5VWN6 2430 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 NEDD4P46934 1319 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 C2CD4DB7Z1M9 353 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 M0QZ92 97 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 PPP1R11O60927 126 aaPredicted RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 LAG3P18627 525 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 HOXA13P31271 388 aaPredicted RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 PPM1AP35813 382 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 ERVFC1P60507 584 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 PAK2Q13177 524 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 PAN2Q504Q3 1202 aaKnown RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 MARCH8Q5T0T0 291 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 CWF19L1Q69YN2 538 aaKnown RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 MFSD1Q9H3U5 465 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 C1orf112Q9NSG2 853 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 DLL3Q9NYJ7 618 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
CHMP6-203ENST00000572525 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
CHMP6-203ENST00000572525 MTCL1Q9Y4B5 1905 aaKnown RBP11.69□□□□□ -0.54
CHMP6-203ENST00000572525 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 LMNAP02545 664 aaKnown RBP11.69□□□□□ -0.54
CHMP6-203ENST00000572525 TCF7P36402 384 aaPredicted RBP11.69□□□□□ -0.54
CHMP6-203ENST00000572525 HAND2P61296 217 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 ANGPT1Q15389 498 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 UTP14CQ5TAP6 766 aaKnown RBP11.69□□□□□ -0.54
CHMP6-203ENST00000572525 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 NME8Q8N427 588 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 COLGALT1Q8NBJ5 622 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 SEPT1Q8WYJ6 367 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 BORCS6Q96GS4 357 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 ZKSCAN3Q9BRR0 538 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 SMARCAD1Q9H4L7 1026 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 POMKQ9H5K3 350 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
CHMP6-203ENST00000572525 GPR179Q6PRD1 2367 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 PATJQ8NI35 1801 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 KLRF2D3W0D1 207 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP6-203ENST00000572525 KIAA1841Q6NSI8 718 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 NLRX1Q86UT6 975 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 THNSL1Q8IYQ7 743 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
CHMP6-203ENST00000572525 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 CELF4Q9BZC1 486 aaKnown RBP11.68□□□□□ -0.54
CHMP6-203ENST00000572525 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 ELAC1Q9H777 363 aaKnown RBP11.68□□□□□ -0.54
CHMP6-203ENST00000572525 VAT1LQ9HCJ6 419 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 PCDHB7Q9Y5E2 793 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 PCDHA2Q9Y5H9 948 aa11.68□□□□□ -0.54
CHMP6-203ENST00000572525 ATRXP46100 2492 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 SMIM35A0A1B0GVV1 85 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 PALM3A6NDB9 673 aaPredicted RBP11.67□□□□□ -0.54
CHMP6-203ENST00000572525 C9IYK1 514 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 ZNF213O14771 459 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 SPOUT1Q5T280 376 aaKnown RBP11.67□□□□□ -0.54
CHMP6-203ENST00000572525 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 ZNF589Q86UQ0 364 aaPredicted RBP11.67□□□□□ -0.54
CHMP6-203ENST00000572525 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 DTWD2Q8NBA8 298 aa11.67□□□□□ -0.54
CHMP6-203ENST00000572525 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms