RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 PRC1O43663 620 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 MGEA5O60502 916 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 EYA4O95677 639 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 SMARCA1P28370 1054 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 NRIP1P48552 1158 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 PLCB4Q15147 1175 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 SMRP1Q8NCR6 262 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 PRSS33Q8NF86 280 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 VN1R2Q8NFZ6 395 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 IGSF9BQ9UPX0 1349 aa21.99■■□□□ 1.11
NUP88-203ENST00000572019 KIF5BP33176 963 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 TYW1BQ6NUM6 668 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 EFHBQ8N7U6 833 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 RUFY2Q8WXA3 655 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 EDAQ92838 391 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 CDHR1Q96JP9 859 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 POP1Q99575 1024 aaKnown RBP21.98■■□□□ 1.11
NUP88-203ENST00000572019 LRRC2Q9BYS8 371 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 CDHR5Q9HBB8 845 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 JPH1Q9HDC5 661 aaPredicted RBP21.98■■□□□ 1.11
NUP88-203ENST00000572019 TRPC6Q9Y210 931 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 WDR81Q562E7 1941 aa21.98■■□□□ 1.11
NUP88-203ENST00000572019 PPFIA3O75145 1194 aa21.97■■□□□ 1.11
NUP88-203ENST00000572019 ARP10275 920 aa21.97■■□□□ 1.11
NUP88-203ENST00000572019 SCG2P13521 617 aa21.97■■□□□ 1.11
NUP88-203ENST00000572019 ITGB3BPQ13352 177 aaPredicted RBP21.97■■□□□ 1.11
NUP88-203ENST00000572019 CELF4Q9BZC1 486 aaKnown RBP21.97■■□□□ 1.11
NUP88-203ENST00000572019 KCNH7Q9NS40 1196 aa21.97■■□□□ 1.11
NUP88-203ENST00000572019 SLC9A2Q9UBY0 812 aa21.97■■□□□ 1.11
NUP88-203ENST00000572019 PCDHA2Q9Y5H9 948 aa21.97■■□□□ 1.11
NUP88-203ENST00000572019 RRN3P2A6NIE6 340 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 LOC730098B7Z3J9 87 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 PER2O15055 1255 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 ACTR2P61160 394 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 COASYQ13057 564 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 PAK2Q13177 524 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 IER5Q5VY09 327 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 NFXL1Q6ZNB6 911 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 TMEM40Q8WWA1 233 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 LZTS2Q9BRK4 669 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 KCNH6Q9H252 994 aa21.96■■□□□ 1.11
NUP88-203ENST00000572019 USP15Q9Y4E8 981 aaPredicted RBP21.96■■□□□ 1.11
NUP88-203ENST00000572019 TMTC3Q6ZXV5 915 aa21.95■■□□□ 1.1
NUP88-203ENST00000572019 HEATR3Q7Z4Q2 680 aa21.95■■□□□ 1.1
NUP88-203ENST00000572019 MFSD14AQ96MC6 490 aa21.95■■□□□ 1.1
NUP88-203ENST00000572019 MXRA8Q9BRK3 442 aa21.95■■□□□ 1.1
NUP88-203ENST00000572019 FTHL17Q9BXU8 183 aa21.95■■□□□ 1.1
NUP88-203ENST00000572019 SQORQ9Y6N5 450 aa21.95■■□□□ 1.1
NUP88-203ENST00000572019 MYH9P35579 1960 aaKnown RBP21.95■■□□□ 1.1
NUP88-203ENST00000572019 TMEM221A6NGB7 291 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 SPDYE3A6NKU9 549 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 M0R296 226 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 CCNE2O96020 404 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 FAM102BQ5T8I3 360 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 WWC2Q6AWC2 1192 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 CASC1Q6TDU7 716 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 MTHFD1LQ6UB35 978 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 TRIM67Q6ZTA4 783 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
NUP88-203ENST00000572019 ERVK-5Q9HDB9 667 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 GINS2Q9Y248 185 aa21.94■■□□□ 1.1
NUP88-203ENST00000572019 NOC2LQ9Y3T9 749 aaKnown RBP21.94■■□□□ 1.1
NUP88-203ENST00000572019 CCDC69A6NI79 296 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 GNAQP50148 359 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 STAT5BP51692 787 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 ERVFC1P60507 584 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 KRT76Q01546 638 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 NFX1Q12986 1120 aaKnown RBP21.93■■□□□ 1.1
NUP88-203ENST00000572019 NAALADL2Q58DX5 795 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 PPP1R16BQ96T49 567 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 LSG1Q9H089 658 aaKnown RBP21.93■■□□□ 1.1
NUP88-203ENST00000572019 AZI2Q9H6S1 392 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 AGO4Q9HCK5 861 aaKnown RBP21.93■■□□□ 1.1
NUP88-203ENST00000572019 MYO10Q9HD67 2058 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 KDM3AQ9Y4C1 1321 aa21.93■■□□□ 1.1
NUP88-203ENST00000572019 CNTNAP5Q8WYK1 1306 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 SMIM35A0A1B0GVV1 85 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 M0QZ92 97 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 STAG3L1P0CL83 205 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 SARSP49591 514 aaKnown RBP21.92■■□□□ 1.1
NUP88-203ENST00000572019 ZXDAP98168 799 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 CBX2Q14781 532 aaPredicted RBP21.92■■□□□ 1.1
NUP88-203ENST00000572019 PLPPR4Q7Z2D5 763 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 PBXIP1Q96AQ6 731 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 TMEM260Q9NX78 707 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 USP34Q70CQ2 3546 aa21.92■■□□□ 1.1
NUP88-203ENST00000572019 NFASCO94856 1347 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 ZBTB42B2RXF5 422 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 DDX39AO00148 427 aaKnown RBP21.91■■□□□ 1.1
NUP88-203ENST00000572019 SLC27A2O14975 620 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 MAFGO15525 162 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 KLRC1P26715 233 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 MCM5P33992 734 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 TCF15Q12870 199 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 BMP8AQ7Z5Y6 402 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 MICU3Q86XE3 530 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 KIAA0319LQ8IZA0 1049 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 FANCBQ8NB91 859 aa21.91■■□□□ 1.1
NUP88-203ENST00000572019 ATP8B4Q8TF62 1192 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms