RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MYL1P05976 194 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 KLRC1P26715 233 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 NF2P35240 595 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 HNRNPH2P55795 449 aaKnown RBP17.72■□□□□ 0.43
RAB40B-206ENST00000571995 JAG1P78504 1218 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
RAB40B-206ENST00000571995 CIAPIN1Q6FI81 312 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 TXLNBQ8N3L3 684 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 SCFD1Q8WVM8 642 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 SH2D4AQ9H788 454 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 ANKZF1Q9H8Y5 726 aa17.72■□□□□ 0.43
RAB40B-206ENST00000571995 HEXIM1O94992 359 aaKnown RBP17.71■□□□□ 0.43
RAB40B-206ENST00000571995 CFAP221Q4G0U5 840 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 CFAP58Q5T655 872 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 DLK2Q6UY11 383 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 DMGDHQ9UI17 866 aaKnown RBP17.71■□□□□ 0.43
RAB40B-206ENST00000571995 AKAP11Q9UKA4 1901 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 COL4A1P02462 1669 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 GOLGA6CA6NDK9 693 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 PDE2AO00408 941 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-206ENST00000571995 NFIBO00712 420 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 SPOPO43791 374 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 ZBED4O75132 1171 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-206ENST00000571995 GOLGA6DP0CG33 693 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 INPP5BP32019 993 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 MTERF2Q49AM1 385 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 CCDC50Q8IVM0 306 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 ANKRD35Q8N283 1001 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 GLT8D2Q9H1C3 349 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-206ENST00000571995 GOLGA6AQ9NYA3 693 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 TUBGCP6Q96RT7 1819 aa17.71■□□□□ 0.43
RAB40B-206ENST00000571995 A0A1W2PQC6 194 aa17.71■□□□□ 0.42
RAB40B-206ENST00000571995 KNOP1Q1ED39 458 aaKnown RBP17.71■□□□□ 0.42
RAB40B-206ENST00000571995 DACT2Q5SW24 774 aa17.71■□□□□ 0.42
RAB40B-206ENST00000571995 RETREG2Q8NC44 543 aa17.71■□□□□ 0.42
RAB40B-206ENST00000571995 MTMR9Q96QG7 549 aa17.71■□□□□ 0.42
RAB40B-206ENST00000571995 OSBPL9Q96SU4 736 aa17.71■□□□□ 0.42
RAB40B-206ENST00000571995 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 LRRIQ4A6NIV6 560 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 GRIPAP1Q4V328 841 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 CWC15Q9P013 229 aaKnown RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 PKD1L3Q7Z443 1732 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 IGBP1P78318 339 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 MAP2K1Q02750 393 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 MESDQ14696 234 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 EPC2Q52LR7 807 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 C2CD6Q53TS8 623 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 RNF187Q5TA31 235 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 CENPPQ6IPU0 288 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 CEP170P1Q96L14 293 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 SEPT9Q9UHD8 586 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 PDIA5Q14554 519 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 ELOA2Q8IYF1 753 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 MTMR8Q96EF0 704 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 DNAJC17Q9NVM6 304 aaKnown RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 LARSQ9P2J5 1176 aaKnown RBP17.7■□□□□ 0.42
RAB40B-206ENST00000571995 JRKLQ9Y4A0 524 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 TJP1Q07157 1748 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 NWD2Q9ULI1 1742 aa17.7■□□□□ 0.42
RAB40B-206ENST00000571995 HNRNPDLO14979 420 aaKnown RBP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 EAPPQ56P03 285 aaPredicted RBP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 MIIPQ5JXC2 388 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 PDXDC1Q6P996 788 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 NCAPG2Q86XI2 1143 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 DDX42Q86XP3 938 aaKnown RBP eCLIP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 CCDC170Q8IYT3 715 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 POMGNT1Q8WZA1 660 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 ANKS1AQ92625 1134 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 KRIT1O00522 736 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 GGCXP38435 758 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 PBX1P40424 430 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 AFAP1L1Q8TED9 768 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 FUT8Q9BYC5 575 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 DDX47Q9H0S4 455 aaKnown RBP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 PTPN22Q9Y2R2 807 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 GAKO14976 1311 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 EIF3CLB5ME19 914 aaKnown RBP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 H2AFZP0C0S5 128 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 ZNF394Q53GI3 561 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 PADI6Q6TGC4 694 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 H2AFVQ71UI9 128 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 EIF3CQ99613 913 aaKnown RBP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 RBM12Q9NTZ6 932 aaKnown RBP17.69■□□□□ 0.42
RAB40B-206ENST00000571995 CALCOCO1Q9P1Z2 691 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
RAB40B-206ENST00000571995 AKAP3O75969 853 aa17.68■□□□□ 0.42
RAB40B-206ENST00000571995 PTK2Q05397 1052 aa17.68■□□□□ 0.42
RAB40B-206ENST00000571995 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
RAB40B-206ENST00000571995 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms