RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CUL5Q93034 780 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 GPRASP2Q96D09 838 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
CHMP6-202ENST00000571457 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
CHMP6-202ENST00000571457 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 TRPV2Q9Y5S1 764 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 PLXNA3P51805 1871 aa13.05□□□□□ -0.32
CHMP6-202ENST00000571457 CACNA1BQ00975 2339 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 FGF18O76093 207 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 MARK3P27448 753 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 TECP42680 631 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
CHMP6-202ENST00000571457 IGBP1P78318 339 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 GRM4Q14833 912 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 SEC23AQ15436 765 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 THNSL1Q8IYQ7 743 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 VN1R2Q8NFZ6 395 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 SMARCC2Q8TAQ2 1214 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 NKD2Q969F2 451 aaPredicted RBP13.04□□□□□ -0.32
CHMP6-202ENST00000571457 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 S1PR5Q9H228 398 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 DIAPH3Q9NSV4 1193 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 TELO2Q9Y4R8 837 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 PCDHB7Q9Y5E2 793 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 IGSF9BQ9UPX0 1349 aa13.04□□□□□ -0.32
CHMP6-202ENST00000571457 NCOR2Q9Y618 2525 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 GSTTP1A0A1W2PQM5 241 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 HIP1O00291 1037 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
CHMP6-202ENST00000571457 INSRRP14616 1297 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 KCNA2P16389 499 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 ID4P47928 161 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
CHMP6-202ENST00000571457 TRDNQ13061 729 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 ODR4Q5SWX8 454 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
CHMP6-202ENST00000571457 NME8Q8N427 588 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 NECTIN4Q96NY8 510 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 CELF4Q9BZC1 486 aaKnown RBP13.03□□□□□ -0.32
CHMP6-202ENST00000571457 AZI2Q9H6S1 392 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 NGRNQ9NPE2 291 aaKnown RBP13.03□□□□□ -0.32
CHMP6-202ENST00000571457 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 PCDHA2Q9Y5H9 948 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 TPRP12270 2363 aaKnown RBP13.03□□□□□ -0.32
CHMP6-202ENST00000571457 KDM3AQ9Y4C1 1321 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 PLXNA4Q9HCM2 1894 aa13.03□□□□□ -0.32
CHMP6-202ENST00000571457 DCHS1Q96JQ0 3298 aa13.02□□□□□ -0.32
CHMP6-202ENST00000571457 ERICH2A1L162 156 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 DENND3A2RUS2 1198 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 PIK3CDO00329 1044 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 FSCN2O14926 492 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 CYTH3O43739 400 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 GATMP50440 423 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 ERVFC1P60507 584 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 KRT76Q01546 638 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 KCNC3Q14003 757 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
CHMP6-202ENST00000571457 CES5AQ6NT32 575 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
CHMP6-202ENST00000571457 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 TBKBP1A7MCY6 615 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 MAFGO15525 162 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 ATP9AO75110 1047 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 LAG3P18627 525 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
CHMP6-202ENST00000571457 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
CHMP6-202ENST00000571457 TMEM62Q0P6H9 643 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
CHMP6-202ENST00000571457 SYCE2Q6PIF2 218 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 USP17L6PQ6QN14 398 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 TMEM105Q8N8V8 129 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 COLGALT1Q8NBJ5 622 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 MRPS27Q92552 414 aaKnown RBP13.01□□□□□ -0.33
CHMP6-202ENST00000571457 CASP10Q92851 521 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 MFSD1Q9H3U5 465 aa13.01□□□□□ -0.33
CHMP6-202ENST00000571457 SMIM35A0A1B0GVV1 85 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
CHMP6-202ENST00000571457 BRD1O95696 1058 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 PPM1AP35813 382 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 CLCN5P51795 746 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 PLCB3Q01970 1234 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 ITIH3Q06033 890 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 MTMR1Q13613 665 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
CHMP6-202ENST00000571457 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 LLGL2Q6P1M3 1020 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms