RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 MRPS6P82932 125 aaKnown RBP34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 KRT76Q01546 638 aa34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 SMAP1Q8IYB5 467 aaPredicted RBP34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 FAM177A1Q8N128 213 aaPredicted RBP34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 DAGLBQ8NCG7 672 aa34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 ATP8B4Q8TF62 1192 aa34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 PCDHA2Q9Y5H9 948 aa34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP34.37■■■■□ 3.09
CTDNEP1-206ENST00000571409 M0R2N6 131 aa34.37■■■■□ 3.09
CTDNEP1-206ENST00000571409 EIF5BO60841 1220 aaKnown RBP34.37■■■■□ 3.09
CTDNEP1-206ENST00000571409 LPIN1Q14693 890 aa34.37■■■■□ 3.09
CTDNEP1-206ENST00000571409 NPY5RQ15761 445 aa34.37■■■■□ 3.09
CTDNEP1-206ENST00000571409 INSL6Q9Y581 213 aa34.37■■■■□ 3.09
CTDNEP1-206ENST00000571409 MSH4O15457 936 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 FBXO47Q5MNV8 452 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 GALNT17Q6IS24 598 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 MTHFD1LQ6UB35 978 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 IL17RAQ96F46 866 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 PRDM6Q9NQX0 595 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 PCDHA10Q9Y5I2 948 aa34.36■■■■□ 3.09
CTDNEP1-206ENST00000571409 STK36Q9NRP7 1315 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 LINC01553A4QN01 128 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 PSAPP07602 524 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 IER5Q5VY09 327 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 CKAP2LQ8IYA6 745 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 MICALL1Q8N3F8 863 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 TOP1MTQ969P6 601 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 KCNJ14Q9UNX9 436 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 SAMM50Q9Y512 469 aa34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 COL4A4P53420 1690 aaPredicted RBP34.35■■■■□ 3.09
CTDNEP1-206ENST00000571409 SMIM35A0A1B0GVV1 85 aa34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 DTNBO60941 627 aa34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 ATP4AP20648 1035 aa34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 HTRA4P83105 476 aaPredicted RBP34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 TMEM62Q0P6H9 643 aa34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 MAFBQ9Y5Q3 323 aaPredicted RBP34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 TRPV2Q9Y5S1 764 aa34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 COL1A2P08123 1366 aa34.34■■■■□ 3.09
CTDNEP1-206ENST00000571409 M0QZ92 97 aa34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 GTPBP6O43824 516 aaPredicted RBP34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 UPP2O95045 317 aa34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 KLRC1P26715 233 aa34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 TSHZ1Q6ZSZ6 1077 aa34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 TGS1Q96RS0 853 aaKnown RBP34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 MTUS1Q9ULD2 1270 aa34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 MTCH2Q9Y6C9 303 aa34.33■■■■□ 3.09
CTDNEP1-206ENST00000571409 MYH9P35579 1960 aaKnown RBP34.32■■■■□ 3.09
CTDNEP1-206ENST00000571409 A0A0C4DFX4 3053 aa34.32■■■■□ 3.09
CTDNEP1-206ENST00000571409 SEC24BO95487 1268 aa34.32■■■■□ 3.08
CTDNEP1-206ENST00000571409 ZNF484Q5JVG2 852 aa34.32■■■■□ 3.08
CTDNEP1-206ENST00000571409 SLC5A5Q92911 643 aa34.32■■■■□ 3.08
CTDNEP1-206ENST00000571409 RIT2Q99578 217 aa34.32■■■■□ 3.08
CTDNEP1-206ENST00000571409 PHF20Q9BVI0 1012 aa34.32■■■■□ 3.08
CTDNEP1-206ENST00000571409 GABBR1Q9UBS5 961 aa34.32■■■■□ 3.08
CTDNEP1-206ENST00000571409 WDR64B1ANS9 1081 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 GAS7O60861 476 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 CTDNEP1O95476 244 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 TDP2O95551 362 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 XBP1P17861 261 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 POU3F3P20264 500 aaPredicted RBP34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 GRB10Q13322 594 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 NONOQ15233 471 aaKnown RBP eCLIP34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 Q4G0T1 1027 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 TRMT1LQ7Z2T5 733 aaKnown RBP34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 BBXQ8WY36 941 aaPredicted RBP34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 YME1L1Q96TA2 773 aa34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 COL25A1Q9BXS0 654 aaPredicted RBP34.31■■■■□ 3.08
CTDNEP1-206ENST00000571409 ZBTB42B2RXF5 422 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 ERVK-21P61565 698 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 LRCH2Q5VUJ6 765 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 KRT40Q6A162 431 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 KRT25Q7Z3Z0 450 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 NME8Q8N427 588 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 GJA10Q969M2 543 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 TEKT3Q9BXF9 490 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 AGO3Q9H9G7 860 aaKnown RBP34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 DISC1Q9NRI5 854 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 SQORQ9Y6N5 450 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 IGSF9BQ9UPX0 1349 aa34.3■■■■□ 3.08
CTDNEP1-206ENST00000571409 CYP3A7-CYP3A51PA0A087WV96 503 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 CHMP2AO43633 222 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 CYP3A7P24462 503 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 CD52P31358 61 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 ME3Q16798 604 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 INF2Q27J81 1249 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 NECAB1Q8N987 351 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 SP7Q8TDD2 431 aaPredicted RBP34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 GDPD5Q8WTR4 605 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 CELF4Q9BZC1 486 aaKnown RBP34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 GJB4Q9NTQ9 266 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 WDR81Q562E7 1941 aa34.29■■■■□ 3.08
CTDNEP1-206ENST00000571409 TRANK1O15050 2925 aa34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 LOXHD1Q8IVV2 1947 aa34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 LPXNO60711 386 aa34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 LARGE1O95461 756 aa34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 NEK4P51957 841 aa34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 UNC45AQ9H3U1 944 aa34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 ORC3Q9UBD5 711 aaPredicted RBP34.28■■■■□ 3.08
CTDNEP1-206ENST00000571409 MOXD1Q6UVY6 613 aa34.27■■■■□ 3.08
CTDNEP1-206ENST00000571409 MBOAT7Q96N66 472 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms