RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TRIB2Q92519 343 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 NAT10Q9H0A0 1025 aaKnown RBP13.29□□□□□ -0.28
CDRT1-206ENST00000571263 BHMT2Q9H2M3 363 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 DACH1Q9UI36 760 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 GNEQ9Y223 722 aaKnown RBP13.29□□□□□ -0.28
CDRT1-206ENST00000571263 PCDHA5Q9Y5H7 936 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 SEPT4O43236 478 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
CDRT1-206ENST00000571263 HOXD8P13378 290 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-206ENST00000571263 CYBAP13498 195 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 SP4Q02446 784 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 PNOCQ13519 176 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 MCM6Q14566 821 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 HSDL1Q3SXM5 330 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 CCDC65Q8IXS2 484 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 CKAP2LQ8IYA6 745 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 BBXQ8WY36 941 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-206ENST00000571263 GLG1Q92896 1179 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 NIFKQ9BYG3 293 aaKnown RBP13.28□□□□□ -0.28
CDRT1-206ENST00000571263 ERAP1Q9NZ08 941 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 ZNF215Q9UL58 517 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-206ENST00000571263 IGSF9BQ9UPX0 1349 aa13.28□□□□□ -0.28
CDRT1-206ENST00000571263 LOXHD1Q8IVV2 1947 aa13.27□□□□□ -0.28
CDRT1-206ENST00000571263 A6NJR5 290 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 DYNC1LI2O43237 492 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-206ENST00000571263 ZEB2O60315 1214 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 OATP04181 439 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 RPN1P04843 607 aaKnown RBP13.27□□□□□ -0.29
CDRT1-206ENST00000571263 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDRT1-206ENST00000571263 RARRES1P49788 294 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 NLRP12P59046 1061 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 PSMC6P62333 389 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 NKX3-2P78367 333 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 STX1AQ16623 288 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 PRAMEF19Q5SWL8 479 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 UNC13DQ70J99 1090 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 GPBP1Q86WP2 473 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 CCDC60Q8IWA6 550 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-206ENST00000571263 MLKLQ8NB16 471 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 PIGOQ8TEQ8 1089 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 DDX12PQ92771 950 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 JPH2Q9BR39 696 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-206ENST00000571263 BCAS3Q9H6U6 928 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 ODF2LQ9ULJ1 636 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 TRIM17Q9Y577 477 aa13.27□□□□□ -0.29
CDRT1-206ENST00000571263 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.26□□□□□ -0.29
CDRT1-206ENST00000571263 MYMKA6NI61 221 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 HBP1O60381 514 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 DGAT1O75907 488 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 KIF20AO95235 890 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 RARBP10826 455 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 GAP43P17677 238 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 CYP11B2P19099 503 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 RFC5P40937 340 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 ASIC1P78348 528 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 PRKCEQ02156 737 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
CDRT1-206ENST00000571263 CUL4BQ13620 913 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 DHX8Q14562 1220 aaKnown RBP13.26□□□□□ -0.29
CDRT1-206ENST00000571263 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 RINT1Q6NUQ1 792 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 C1orf186Q6ZWK4 172 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 TLK2Q86UE8 772 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 SLC17A8Q8NDX2 589 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 MCPH1Q8NEM0 835 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 ATP8B4Q8TF62 1192 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 AFG1LQ8WV93 481 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 COPS5Q92905 334 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 CEP170P1Q96L14 293 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 MTRQ99707 1265 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 KATNAL1Q9BW62 490 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 C17orf75Q9HAS0 396 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
CDRT1-206ENST00000571263 FOXN1O15353 648 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 TBCAO75347 108 aaKnown RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 RHOBTB3O94955 611 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 MMP3P08254 477 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 SCP2P22307 547 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 CNGA1P29973 690 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 GRK4P32298 578 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 ABCD1P33897 745 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 GJA9P57773 515 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 TYRO3Q06418 890 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 STIM1Q13586 685 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 MORC3Q14149 939 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 ZNF484Q5JVG2 852 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 ZNF658Q5TYW1 1059 aaPredicted RBP13.25□□□□□ -0.29
CDRT1-206ENST00000571263 PADI6Q6TGC4 694 aa13.25□□□□□ -0.29
CDRT1-206ENST00000571263 ANO5Q75V66 913 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms