RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CLASP2O75122 1294 aaKnown RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 F2P00734 622 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 CHRNA1P02708 482 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 FDX1P10109 184 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 GHRP10912 638 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 LIMK1P53667 647 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 UBE3AQ05086 875 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 DGKDQ16760 1214 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 AASDHQ4L235 1098 aaPredicted RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 TMC5Q6UXY8 1006 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 OTOP3Q7RTS5 596 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 LCORLQ8N3X6 602 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 HNRNPLLQ8WVV9 542 aaKnown RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 ATP6V0A1Q93050 837 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 BCO2Q9BYV7 579 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 ENTPD7Q9NQZ7 604 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 NYAP2Q9P242 653 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 IGSF9Q9P2J2 1179 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 CLIP2Q9UDT6 1046 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 ISY1Q9ULR0 285 aaKnown RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 SUPT16HQ9Y5B9 1047 aaKnown RBP8.21□□□□□ -1.1
CHD3-213ENST00000571249 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
CHD3-213ENST00000571249 TMEM232C9JQI7 657 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 PRKAB2O43741 272 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 CAPNS1P04632 268 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 SRFP11831 508 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 BMP3P12645 472 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 IBSPP21815 317 aaPredicted RBP8.2□□□□□ -1.1
CHD3-213ENST00000571249 CD72P21854 359 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 SRSF1Q07955 248 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHD3-213ENST00000571249 ZNF252P-AS1Q0IIN9 211 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 SNW1Q13573 536 aaKnown RBP8.2□□□□□ -1.1
CHD3-213ENST00000571249 CCDC184Q52MB2 194 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 SPOUT1Q5T280 376 aaKnown RBP8.2□□□□□ -1.1
CHD3-213ENST00000571249 STPG1Q5TH74 334 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 C12orf60Q5U649 245 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 KIAA1211LQ6NV74 962 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 TMED8Q6PL24 325 aaPredicted RBP8.2□□□□□ -1.1
CHD3-213ENST00000571249 THNSL1Q8IYQ7 743 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 LRIG1Q96JA1 1093 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 MEIS3Q99687 375 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 MYL10Q9BUA6 226 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 PCDHB12Q9Y5F1 795 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 RAI2Q9Y5P3 530 aa8.2□□□□□ -1.1
CHD3-213ENST00000571249 MYH7BA7E2Y1 1941 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 LOC102724159A0A0B4J2E5 919 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 NFIBO00712 420 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 SORBS3O60504 671 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 GH1P01241 217 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 EPCAMP16422 314 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 FECHP22830 423 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 CALML3P27482 149 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 NOVA1P51513 510 aaKnown RBP8.19□□□□□ -1.1
CHD3-213ENST00000571249 STARD6P59095 220 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 TROAPQ12815 778 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 IKQ13123 557 aaPredicted RBP8.19□□□□□ -1.1
CHD3-213ENST00000571249 SRSF5Q13243 272 aaKnown RBP8.19□□□□□ -1.1
CHD3-213ENST00000571249 LPIN1Q14693 890 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 PWP2Q15269 919 aaKnown RBP8.19□□□□□ -1.1
CHD3-213ENST00000571249 PTPN14Q15678 1187 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 SLFN13Q68D06 897 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 PDE12Q6L8Q7 609 aaKnown RBP8.19□□□□□ -1.1
CHD3-213ENST00000571249 SLC30A10Q6XR72 485 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 RUFY4Q6ZNE9 571 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 SEPT14Q6ZU15 432 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 PROSER1Q86XN7 944 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 RPAP2Q8IXW5 612 aaPredicted RBP8.19□□□□□ -1.1
CHD3-213ENST00000571249 SSH1Q8WYL5 1049 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 KATNAL1Q9BW62 490 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 ARMT1Q9H993 441 aa8.19□□□□□ -1.1
CHD3-213ENST00000571249 CACNA1EQ15878 2313 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 KANSL1LA0AUZ9 987 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 PTPDC1A2A3K4 754 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 C17orf102A2RUQ5 167 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 C2orf71A6NGG8 1288 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 PYCARD-AS1I3L0S3 204 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 HRO43593 1189 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 TDGF1P13385 188 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 PDE6AP16499 860 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 EDNRBP24530 442 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 STAT2P52630 851 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 MTX1Q13505 466 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 DSG2Q14126 1118 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 UBXN2BQ14CS0 331 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 SLC9C2Q5TAH2 1124 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 CCDC149Q6ZUS6 474 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 ZNF605Q86T29 641 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 AMOTL1Q8IY63 956 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 STK11IPQ8N1F8 1099 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 CELF5Q8N6W0 485 aaKnown RBP8.18□□□□□ -1.1
CHD3-213ENST00000571249 COLGALT1Q8NBJ5 622 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 STAG1Q8WVM7 1258 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 RNPEPQ9H4A4 650 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 SMOC1Q9H4F8 434 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms