RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PCYT2Q99447 389 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 MTRQ99707 1265 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 BHMT2Q9H2M3 363 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 ARHGEF35A5YM69 484 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 ZNF862O60290 1169 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 LGR5O75473 907 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 INHAP05111 366 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 MMP3P08254 477 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 CASP1P29466 404 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 GRK4P32298 578 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 MDM2Q00987 491 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 AMPD3Q01432 767 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 RBM43Q6ZSC3 357 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 TRIM50Q86XT4 487 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 GLG1Q92896 1179 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 ANP32EQ9BTT0 268 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 LRRC27Q9C0I9 530 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
HERPUD1-219ENST00000570273 ZBTB39O15060 712 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 SEPT4O43236 478 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 SMC2O95347 1197 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 STAT5BP51692 787 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 TRMT1LQ7Z2T5 733 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 DBR1Q9UK59 544 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 Q9Y3F1 56 aa17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-219ENST00000570273 MYMKA6NI61 221 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 DUSP11O75319 330 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 OATP04181 439 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 LGALS2P05162 132 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 MYL1P05976 194 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 RARBP10826 455 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 ASIC1P78348 528 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 DPYDQ12882 1025 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 CUL4BQ13620 913 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 XKR3Q5GH77 459 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 PLA2G4FQ68DD2 849 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 SYT2Q8N9I0 419 aaPredicted RBP17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 FAM167AQ96KS9 214 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 SMARCAD1Q9H4L7 1026 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 ANKEF1Q9NU02 776 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 KIAA1468Q9P260 1216 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
HERPUD1-219ENST00000570273 TMEM150BA6NC51 233 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 ZNF286BP0CG31 522 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 HOXD8P13378 290 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 CYP11B2P19099 503 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 MARK3P27448 753 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 CPT1AP50416 773 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 DGKDQ16760 1214 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 OTUD6AQ7L8S5 288 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 PLPPR4Q7Z2D5 763 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 RUSC1Q9BVN2 902 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 PCDHA5Q9Y5H7 936 aa17.17■□□□□ 0.34
HERPUD1-219ENST00000570273 A6NJR5 290 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 PPFIA4O75335 1185 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 XRCC6P12956 609 aaKnown RBP eCLIP17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 ATP4AP20648 1035 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 RARRES1P49788 294 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 SASS6Q6UVJ0 657 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 ANO5Q75V66 913 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 SH3TC2Q8TF17 1288 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 SPC25Q9HBM1 224 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 ZNF215Q9UL58 517 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 SYNRGQ9UMZ2 1314 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 CENPFP49454 3210 aa17.16■□□□□ 0.34
HERPUD1-219ENST00000570273 BIN1O00499 593 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 USO1O60763 962 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 STBD1O95210 358 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 RPN1P04843 607 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 SLC26A2P50443 739 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 NPEPPSP55786 919 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 BEX3Q00994 111 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 FSCN1Q16658 493 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 PADI6Q6TGC4 694 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 CTU1Q7Z7A3 348 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 ATP8B4Q8TF62 1192 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 DDX12PQ92771 950 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 CEP170P1Q96L14 293 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
HERPUD1-219ENST00000570273 NRBP2Q9NSY0 501 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms