RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 PPP4R3AQ6IN85 833 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 ZNF746Q6NUN9 644 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 MIS18BP1Q6P0N0 1132 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 PLPPR4Q7Z2D5 763 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 MIER3Q7Z3K6 550 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 FERMT3Q86UX7 667 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 TMEM199Q8N511 208 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 DYDC2Q96IM9 177 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 FAM161BQ96MY7 647 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 RIT2Q99578 217 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 TEKT3Q9BXF9 490 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 PCDHA10Q9Y5I2 948 aa11.08□□□□□ -0.64
GTF3C1-212ENST00000570129 MBLAC1A4D2B0 266 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 FGBP02675 491 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 PSAPP07602 524 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 U2AF2P26368 475 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 KRT76Q01546 638 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 PPIGQ13427 754 aaKnown RBP eCLIP11.07□□□□□ -0.646e-13■■□□□ 13.5
GTF3C1-212ENST00000570129 FOXD4L5Q5VV16 416 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 NCAPH2Q6IBW4 605 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 MTHFD1LQ6UB35 978 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 MOXD1Q6UVY6 613 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 NOSTRINQ8IVI9 506 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 CKAP2LQ8IYA6 745 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 KIAA0319LQ8IZA0 1049 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 LRRC71Q8N4P6 559 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 ATP8B4Q8TF62 1192 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 FOXD4L4Q8WXT5 416 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 CEP89Q96ST8 783 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 AZI2Q9H6S1 392 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 AGO3Q9H9G7 860 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 POLD4Q9HCU8 107 aa11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 ZNF215Q9UL58 517 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-212ENST00000570129 POTEMA6NI47 508 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 PP2D1A8MPX8 630 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 WDR64B1ANS9 1081 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 RSPH10B2B2RC85 870 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 CSDE1O75534 798 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 C22orf31O95567 290 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 RSPH10BP0C881 870 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 CDC25AP30304 524 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 CLCN3P51790 818 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 DEFB103AP81534 67 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 PRKCEQ02156 737 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 CYP4A11Q02928 519 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 MGAT3Q09327 533 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 CALCRLQ16602 461 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 ECM1Q16610 540 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 DBF4BQ8NFT6 615 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 HERVK_113Q902F9 699 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 CHAMP1Q96JM3 812 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 FOXP1Q9H334 677 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 TUBE1Q9UJT0 475 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 YBX2Q9Y2T7 364 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 NRCAMQ92823 1304 aa11.06□□□□□ -0.64
GTF3C1-212ENST00000570129 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 SLITRK3O94933 977 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 VTNP04004 478 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 GHRP10912 638 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 RBL2Q08999 1139 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 BFSP2Q13515 415 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 LPIN1Q14693 890 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 SAFBQ15424 915 aaKnown RBP eCLIP11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 TARBP2Q15633 366 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 MTERF2Q49AM1 385 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 FAM160B1Q5W0V3 765 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 ANO5Q75V66 913 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 KSR1Q8IVT5 923 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 TMEM40Q8WWA1 233 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 FAM20AQ96MK3 541 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 EIF2AK1Q9BQI3 630 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 SEZ6LQ9BYH1 1024 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 TTYH1Q9H313 450 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 TTC12Q9H892 705 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 BRMS1Q9HCU9 246 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 CDY2AQ9Y6F7 541 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
GTF3C1-212ENST00000570129 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 K7ELQ4 463 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 MARCH6O60337 910 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 HBP1O60381 514 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms