RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 FAM110CQ1W6H9 321 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 NAALADL2Q58DX5 795 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 NCAPH2Q6IBW4 605 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 CALR3Q96L12 384 aaKnown RBP11.23□□□□□ -0.61
GDE1-205ENST00000569899 FGD4Q96M96 766 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 CDK15Q96Q40 435 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 ZNF577Q9BSK1 485 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
GDE1-205ENST00000569899 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 KCNH7Q9NS40 1196 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 CPA4Q9UI42 421 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
GDE1-205ENST00000569899 DNAJC25-GNG10A0A024R161 153 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 A0A087WWV3 80 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 IPO5O00410 1097 aaKnown RBP11.22□□□□□ -0.61
GDE1-205ENST00000569899 GAS7O60861 476 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 PSMD10O75832 226 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 FCER1AP12319 257 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 GRB10Q13322 594 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 PDIA5Q14554 519 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 KCTD2Q14681 263 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 AGO4Q9HCK5 861 aaKnown RBP11.22□□□□□ -0.61
GDE1-205ENST00000569899 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
GDE1-205ENST00000569899 DDX39AO00148 427 aaKnown RBP11.21□□□□□ -0.61
GDE1-205ENST00000569899 EML1O00423 815 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 CHMP2AO43633 222 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 SLFN14P0C7P3 912 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 CASP1P29466 404 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 TYRO3Q06418 890 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 ITGB3BPQ13352 177 aaPredicted RBP11.21□□□□□ -0.61
GDE1-205ENST00000569899 POSTNQ15063 836 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 TMEM119Q4V9L6 283 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 KRT79Q5XKE5 535 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 XRRA1Q6P2D8 792 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 VASH1Q7L8A9 365 aaPredicted RBP11.21□□□□□ -0.61
GDE1-205ENST00000569899 CEP57L1Q8IYX8 460 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 IQUBQ8NA54 791 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 STAMQ92783 540 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 INPP4AQ96PE3 977 aaPredicted RBP11.21□□□□□ -0.61
GDE1-205ENST00000569899 PYM1Q9BRP8 204 aaKnown RBP11.21□□□□□ -0.61
GDE1-205ENST00000569899 UNC45AQ9H3U1 944 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 TSPY26PQ9H489 355 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
GDE1-205ENST00000569899 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 USP25Q9UHP3 1055 aa11.21□□□□□ -0.61
GDE1-205ENST00000569899 AOC2O75106 756 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 MED24O75448 989 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 EDNRBP24530 442 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 MYH9P35579 1960 aaKnown RBP11.2□□□□□ -0.62
GDE1-205ENST00000569899 CCT6AP40227 531 aaKnown RBP11.2□□□□□ -0.62
GDE1-205ENST00000569899 AFMP43652 599 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PPP2R5CQ13362 524 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 ECM1Q16610 540 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 GPRASP2Q96D09 838 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PAGE5Q96GU1 130 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 CDK5RAP3Q96JB5 506 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 TEKT3Q9BXF9 490 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 CDV3Q9UKY7 258 aaKnown RBP11.2□□□□□ -0.62
GDE1-205ENST00000569899 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 DHX15O43143 795 aaKnown RBP11.2□□□□□ -0.62
GDE1-205ENST00000569899 ATP9AO75110 1047 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 CCDC192P0DO97 292 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 ADORA2AP29274 412 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 INHBEP58166 350 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PRR20EP86478 221 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PRR20CP86479 221 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PRR20DP86480 221 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PRR20BP86481 221 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 PRR20AP86496 221 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 CRHR2Q13324 411 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 STXBP2Q15833 593 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 HAUS3Q68CZ6 603 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 B3GNT9Q6UX72 402 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 OTOP1Q7RTM1 612 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 KCNK18Q7Z418 384 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 NLRX1Q86UT6 975 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 SNIP1Q8TAD8 396 aaKnown RBP11.2□□□□□ -0.62
GDE1-205ENST00000569899 CAPNS2Q96L46 248 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 RIT2Q99578 217 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 IVNS1ABPQ9Y6Y0 642 aa11.2□□□□□ -0.62
GDE1-205ENST00000569899 FSD2A1L4K1 749 aa11.19□□□□□ -0.62
GDE1-205ENST00000569899 BIN1O00499 593 aa11.19□□□□□ -0.62
GDE1-205ENST00000569899 TLR2O60603 784 aa11.19□□□□□ -0.62
GDE1-205ENST00000569899 COBLO75128 1261 aa11.19□□□□□ -0.62
GDE1-205ENST00000569899 STAM2O75886 525 aa11.19□□□□□ -0.62
GDE1-205ENST00000569899 KCNA2P16389 499 aa11.19□□□□□ -0.62
GDE1-205ENST00000569899 GRM5P41594 1212 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms