RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CD207Q9UJ71 328 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 PADI3Q9ULW8 664 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-220ENST00000569827 GINS2Q9Y248 185 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 TRPV2Q9Y5S1 764 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 STXBP3O00186 592 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 ARP10275 920 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 NRIP1P48552 1158 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 PAK2Q13177 524 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 TYW1BQ6NUM6 668 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 SPPL3Q8TCT6 385 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 POF1BQ8WVV4 589 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 KCNH7Q9NS40 1196 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 TMEM260Q9NX78 707 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 CLEC1BQ9P126 229 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 SLC9A2Q9UBY0 812 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 RWDD3Q9Y3V2 267 aa13.82□□□□□ -0.2
CAPN3-220ENST00000569827 CFAP54Q96N23 3096 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 SLC27A2O14975 620 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 PER2O15055 1255 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 MGEA5O60502 916 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 GLP2RO95838 553 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 SCG2P13521 617 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 ACTR2P61160 394 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 NFX1Q12986 1120 aaKnown RBP13.81□□□□□ -0.2
CAPN3-220ENST00000569827 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
CAPN3-220ENST00000569827 ADAM15Q13444 863 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 WWC2Q6AWC2 1192 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 TMTC3Q6ZXV5 915 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
CAPN3-220ENST00000569827 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
CAPN3-220ENST00000569827 CRIPAKQ8N1N5 446 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 CDHR1Q96JP9 859 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 LSG1Q9H089 658 aaKnown RBP13.81□□□□□ -0.2
CAPN3-220ENST00000569827 CDHR5Q9HBB8 845 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 CNTNAP5Q8WYK1 1306 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 IGSF9BQ9UPX0 1349 aa13.81□□□□□ -0.2
CAPN3-220ENST00000569827 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 M0QZ92 97 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 MCM5P33992 734 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 IER5Q5VY09 327 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 SKAP1Q86WV1 359 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 NPAS4Q8IUM7 802 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 TMEM40Q8WWA1 233 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 MXRA8Q9BRK3 442 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 CELF4Q9BZC1 486 aaKnown RBP13.8□□□□□ -0.2
CAPN3-220ENST00000569827 AZI2Q9H6S1 392 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 LRFN2Q9ULH4 789 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
CAPN3-220ENST00000569827 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 ADAMTS3O15072 1205 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 NCK2O43639 380 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-220ENST00000569827 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 GNAQP50148 359 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 STAT5BP51692 787 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 NAPAP54920 295 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 KRT76Q01546 638 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 HERC4Q5GLZ8 1057 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-220ENST00000569827 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
CAPN3-220ENST00000569827 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 IER5LQ5T953 404 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 CREB3L3Q68CJ9 461 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 MTHFD1LQ6UB35 978 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 VN1R2Q8NFZ6 395 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 P2RX5Q93086 422 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 SDF4Q9BRK5 362 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 APOL5Q9BWW9 433 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 AGO4Q9HCK5 861 aaKnown RBP13.79□□□□□ -0.2
CAPN3-220ENST00000569827 NOC2LQ9Y3T9 749 aaKnown RBP13.79□□□□□ -0.2
CAPN3-220ENST00000569827 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-220ENST00000569827 PCDHA2Q9Y5H9 948 aa13.79□□□□□ -0.2
CAPN3-220ENST00000569827 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 CCNE2O96020 404 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 CCDC60Q8IWA6 550 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-220ENST00000569827 EFHBQ8N7U6 833 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 SMRP1Q8NCR6 262 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 PRSS33Q8NF86 280 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
CAPN3-220ENST00000569827 FTHL17Q9BXU8 183 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 UPF3BQ9BZI7 483 aaKnown RBP13.78□□□□□ -0.2
CAPN3-220ENST00000569827 CDH22Q9UJ99 828 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
CAPN3-220ENST00000569827 VPS13AQ96RL7 3174 aa13.77□□□□□ -0.2
CAPN3-220ENST00000569827 MYO15AQ9UKN7 3530 aa13.77□□□□□ -0.2
CAPN3-220ENST00000569827 BACH1O14867 736 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 NFASCO94856 1347 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 STAG3L1P0CL83 205 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 FGFR1P11362 822 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 KLRC1P26715 233 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms