RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 STAG3L1P0CL83 205 aa22.07■■□□□ 1.12
CDH11-218ENST00000569783 TMEM62Q0P6H9 643 aa22.07■■□□□ 1.12
CDH11-218ENST00000569783 PAK2Q13177 524 aa22.07■■□□□ 1.12
CDH11-218ENST00000569783 PLVAPQ9BX97 442 aa22.07■■□□□ 1.12
CDH11-218ENST00000569783 SMIM35A0A1B0GVV1 85 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 MEIS1O00470 390 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 BACH1O14867 736 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 GRM6O15303 877 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 SREBF1P36956 1147 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 FUT2Q10981 343 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 ITGB3BPQ13352 177 aaPredicted RBP22.06■■□□□ 1.12
CDH11-218ENST00000569783 TSGA10IPQ3SY00 556 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 FAM160B1Q5W0V3 765 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 NIPA1Q7RTP0 329 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 NPAS4Q8IUM7 802 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 TRAPPC12Q8WVT3 735 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 CELF4Q9BZC1 486 aaKnown RBP22.06■■□□□ 1.12
CDH11-218ENST00000569783 PADI3Q9ULW8 664 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 RALGAPA2Q2PPJ7 1873 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 BRWD1Q9NSI6 2320 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 IGSF9BQ9UPX0 1349 aa22.06■■□□□ 1.12
CDH11-218ENST00000569783 NLRC5Q86WI3 1866 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 CCDC196A0A1B0GTZ2 297 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 DDX39AO00148 427 aaKnown RBP22.05■■□□□ 1.12
CDH11-218ENST00000569783 ATG7O95352 703 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 RCAN1P53805 252 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 KRT76Q01546 638 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 ADCK5Q3MIX3 580 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 MTHFD1LQ6UB35 978 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 CENPQQ7L2Z9 268 aaPredicted RBP22.05■■□□□ 1.12
CDH11-218ENST00000569783 CMTR2Q8IYT2 770 aaKnown RBP22.05■■□□□ 1.12
CDH11-218ENST00000569783 PPP2R3CQ969Q6 453 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 TMEM260Q9NX78 707 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 LRFN2Q9ULH4 789 aa22.05■■□□□ 1.12
CDH11-218ENST00000569783 FAM86C2PA6NEL3 165 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 HBP1O60381 514 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 LINC00271P0C7V0 271 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 ALADP13716 330 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 CLK2P49760 499 aaKnown RBP22.04■■□□□ 1.12
CDH11-218ENST00000569783 COL19A1Q14993 1142 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 PLA2G4DQ86XP0 818 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 RASEFQ8IZ41 740 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 LINC01599Q8WXQ3 324 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 ARIH1Q9Y4X5 557 aaPredicted RBP22.04■■□□□ 1.12
CDH11-218ENST00000569783 KDM3AQ9Y4C1 1321 aa22.04■■□□□ 1.12
CDH11-218ENST00000569783 CDC45O75419 566 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 CSPG5O95196 566 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 MMP1P03956 469 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 SCG2P13521 617 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 KLRC1P26715 233 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 CDC27P30260 824 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 METAP2P50579 478 aaKnown RBP eCLIP22.03■■□□□ 1.12
CDH11-218ENST00000569783 NFX1Q12986 1120 aaKnown RBP22.03■■□□□ 1.12
CDH11-218ENST00000569783 NAALADL2Q58DX5 795 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 ODR4Q5SWX8 454 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 JAKMIP3Q5VZ66 844 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 MCTP2Q6DN12 878 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 MIS18BP1Q6P0N0 1132 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 PDXDC2PQ6P474 469 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 FAM43BQ6ZT52 329 aaPredicted RBP22.03■■□□□ 1.12
CDH11-218ENST00000569783 CCDC12Q8WUD4 166 aaPredicted RBP22.03■■□□□ 1.12
CDH11-218ENST00000569783 P2RX5Q93086 422 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 RNF216Q9NWF9 866 aaPredicted RBP22.03■■□□□ 1.12
CDH11-218ENST00000569783 PRKAG3Q9UGI9 489 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 TCEAL9Q9UHQ7 104 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 GINS2Q9Y248 185 aa22.03■■□□□ 1.12
CDH11-218ENST00000569783 IGKV6D-21A0A0A0MT36 114 aa22.02■■□□□ 1.12
CDH11-218ENST00000569783 PFKFB3Q16875 520 aaPredicted RBP22.02■■□□□ 1.12
CDH11-218ENST00000569783 PAN2Q504Q3 1202 aaKnown RBP22.02■■□□□ 1.12
CDH11-218ENST00000569783 ABHD15Q6UXT9 468 aa22.02■■□□□ 1.12
CDH11-218ENST00000569783 RTN4RL1Q86UN2 441 aaPredicted RBP22.02■■□□□ 1.12
CDH11-218ENST00000569783 CKAP2LQ8IYA6 745 aa22.02■■□□□ 1.12
CDH11-218ENST00000569783 ATP8B4Q8TF62 1192 aa22.02■■□□□ 1.12
CDH11-218ENST00000569783 ALG13Q9NP73 1137 aaKnown RBP22.02■■□□□ 1.12
CDH11-218ENST00000569783 ZNF302Q9NR11 478 aa22.02■■□□□ 1.12
CDH11-218ENST00000569783 FAM217BQ9NTX9 383 aaPredicted RBP22.02■■□□□ 1.12
CDH11-218ENST00000569783 PLAGL2Q9UPG8 496 aa22.02■■□□□ 1.12
CDH11-218ENST00000569783 MRPL42Q9Y6G3 142 aaKnown RBP22.02■■□□□ 1.12
CDH11-218ENST00000569783 COL1A2P08123 1366 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 TTC3P53804 2025 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 IPO5O00410 1097 aaKnown RBP22.01■■□□□ 1.11
CDH11-218ENST00000569783 CCNE2O96020 404 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 IBSPP21815 317 aaPredicted RBP22.01■■□□□ 1.11
CDH11-218ENST00000569783 ADD1P35611 737 aaKnown RBP22.01■■□□□ 1.11
CDH11-218ENST00000569783 HYAL1Q12794 435 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 ZNF484Q5JVG2 852 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 IGFLR1Q9H665 355 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 C6orf50Q9HD87 102 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 C11orf16Q9NQ32 467 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 PCDHB7Q9Y5E2 793 aa22.01■■□□□ 1.11
CDH11-218ENST00000569783 FAM86B1E9PN63 330 aa22■■□□□ 1.11
CDH11-218ENST00000569783 RPS6KA5O75582 802 aa22■■□□□ 1.11
CDH11-218ENST00000569783 CYP3A4P08684 503 aa22■■□□□ 1.11
CDH11-218ENST00000569783 FAM86B2P0C5J1 330 aa22■■□□□ 1.11
CDH11-218ENST00000569783 SETQ01105 290 aaPredicted RBP22■■□□□ 1.11
CDH11-218ENST00000569783 CSPP1Q1MSJ5 1256 aa22■■□□□ 1.11
CDH11-218ENST00000569783 TMEM266Q2M3C6 531 aa22■■□□□ 1.11
CDH11-218ENST00000569783 CTC1Q2NKJ3 1217 aa22■■□□□ 1.11
CDH11-218ENST00000569783 SWSAP1Q6NVH7 229 aa22■■□□□ 1.11
CDH11-218ENST00000569783 SKAP1Q86WV1 359 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms