RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LCA5LO95447 670 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CFBP00751 764 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 LMNB1P20700 586 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 COL9A1P20849 921 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 HOXD13P35453 343 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 STAT3P40763 770 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF131P52739 623 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 USP14P54578 494 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 MCCD1P59942 119 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 KRT83P78385 493 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 SETQ01105 290 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 PPP2R3AQ06190 1150 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 MYBPC2Q14324 1141 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 LRRC41Q15345 812 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 KNOP1Q1ED39 458 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 NCAPH2Q6IBW4 605 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 RINT1Q6NUQ1 792 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 XRRA1Q6P2D8 792 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CCDC174Q6PII3 467 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 POTEBQ6S5H4 581 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 NUDT18Q6ZVK8 323 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 C1orf186Q6ZWK4 172 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 FRMD5Q7Z6J6 570 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CREBRFQ8IUR6 639 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 TRIM59Q8IWR1 403 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CDAN1Q8IWY9 1227 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 NEK9Q8TD19 979 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 WDR24Q96S15 920 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 EIF3CQ99613 913 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CHP1Q99653 195 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 FEZ1Q99689 392 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 SLF1Q9BQI6 1058 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 GLIS2Q9BZE0 524 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 NUCKS1Q9H1E3 243 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 ALG2Q9H553 416 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 HAUS4Q9H6D7 363 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 OLFML3Q9NRN5 406 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 AGPAT5Q9NUQ2 364 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 ZNHIT6Q9NWK9 470 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CGNQ9P2M7 1197 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 CNOT7Q9UIV1 285 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 ADAMTS5Q9UNA0 930 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 REXO2Q9Y3B8 237 aaKnown RBP5.95□□□□□ -1.46
SF3B3-213ENST00000569687 COL4A3BPQ9Y5P4 624 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 UBIAD1Q9Y5Z9 338 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 MRFAP1Q9Y605 127 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 IVNS1ABPQ9Y6Y0 642 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 FRMPD4Q14CM0 1322 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF541Q9H0D2 1346 aa5.95□□□□□ -1.46
SF3B3-213ENST00000569687 MYH7BA7E2Y1 1941 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 NPHP3-ACAD11A0A0J9YXS1 232 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 C19orf81C9J6K1 198 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 CETN3O15182 167 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 EIF3DO15371 548 aaKnown RBP eCLIP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 MAFGO15525 162 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 DHX15O43143 795 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 ZBED4O75132 1171 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 URI1O94763 535 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 SSBP05455 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 KRT18P05783 430 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 POTEIP0CG38 1075 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 ARP10275 920 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 MAPTP10636 758 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 YBX3P16989 372 aaKnown RBP eCLIP5.94□□□□□ -1.463e-8■□□□□ 8.6
SF3B3-213ENST00000569687 TRIM21P19474 475 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 GUCY2CP25092 1073 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 DNAJB2P25686 324 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 RPL13P26373 211 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 CYLC1P35663 651 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 GMPSP49915 693 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 OAZ1P54368 228 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 KCNMA1Q12791 1236 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 ADAM9Q13443 819 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 LRCH2Q5VUJ6 765 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 DPY19L2P1Q6NXN4 242 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 POTEGQ6S5H5 508 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 POTEEQ6S8J3 1075 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 RSRC2Q7L4I2 434 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 GLIS3Q8NEA6 775 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 SYTL5Q8TDW5 730 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 C12orf42Q96LP6 360 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 AGBL1Q96MI9 1066 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 DESI2Q9BSY9 194 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 STRA6Q9BX79 667 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF341Q9BYN7 854 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 NHEJ1Q9H9Q4 299 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 METTL14Q9HCE5 456 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 FBXO28Q9NVF7 368 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 RGL1Q9NZL6 768 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 SEL1LQ9UBV2 794 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 TSKSQ9UJT2 592 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 CDC23Q9UJX2 597 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 DBR1Q9UK59 544 aaKnown RBP5.94□□□□□ -1.46
SF3B3-213ENST00000569687 CCPG1Q9ULG6 757 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 PPP1R9AQ9ULJ8 1098 aa5.94□□□□□ -1.46
SF3B3-213ENST00000569687 SSU72P8A0A1W2PR75 194 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SHTN1A0MZ66 631 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 CTAGE9A4FU28 777 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms