RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PTPREP23469 700 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 LIFRP42702 1097 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 GJA8P48165 433 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 POLR2FP61218 127 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 KRT31Q15323 416 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 AKNAD1Q5T1N1 836 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PATL1Q86TB9 770 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RFWD2Q8NHY2 731 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 FAM161BQ96MY7 647 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SERPINB12Q96P63 405 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ZNF229Q9UJW7 825 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 DNMT1P26358 1616 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 NPATQ14207 1427 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ABCB11O95342 1321 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 PCDH11XQ9BZA7 1347 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 FMNL1O95466 1100 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 SKIV2L2P42285 1042 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 PSMC1P62191 440 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 GUCY1A3Q02108 690 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ATAD3BQ5T9A4 648 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 PIK3AP1Q6ZUJ8 805 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 WDR60Q8WVS4 1066 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 STX18Q9P2W9 335 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 WARS2Q9UGM6 360 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 PALD1Q9ULE6 856 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 GPATCH8Q9UKJ3 1502 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 COPEO14579 308 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ADCY7P51828 1080 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ILF2Q12905 390 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 CALCRLQ16602 461 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 CCDC153Q494R4 210 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 USH1GQ495M9 461 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ARMCX5Q6P1M9 558 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 EPC1Q9H2F5 836 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 SAP30BPQ9UHR5 308 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 DENND2AQ9ULE3 1009 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 FAM25AB3EWG3 89 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 FAM25CB3EWG5 89 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 FAM25GB3EWG6 89 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 MAP2K7O14733 419 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 BUB1O43683 1085 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 DTNBO60941 627 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ALOX5P09917 674 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 CCDC166P0CW27 439 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 SRGAP2BP0DMP2 458 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 GJC1P36383 396 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 LMBR1LQ6UX01 489 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 PACS2Q86VP3 889 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 TRIM69Q86WT6 500 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 BLIDQ8IZY5 108 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 HAUS7Q99871 368 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 NDST4Q9H3R1 872 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 GOLPH3LQ9H4A5 285 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 EDC4Q6P2E9 1401 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 XPOTO43592 962 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ATF3P18847 181 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ATXN2LQ8WWM7 1075 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 WNT8AQ9H1J5 351 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 TRMT112Q9UI30 125 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 NOS1P29475 1434 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 CES2O00748 559 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 TBC1D12O60347 775 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ARL1P40616 181 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 GYS2P54840 703 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 KCNB1Q14721 858 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 RABGAP1LQ5R372 815 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ATP11CQ8NB49 1132 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 RMI1Q9H9A7 625 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 TIMMDC1Q9NPL8 285 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 TUBE1Q9UJT0 475 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 HGSO14964 777 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ITIH2P19823 946 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 CYFIP1Q7L576 1253 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 RSPH3Q86UC2 560 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 STX19Q8N4C7 294 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 POP5Q969H6 163 aaKnown RBP7.62□□□□□ -1.19
CNOT1-216ENST00000569240 NSL1Q96IY1 281 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 TRPC7Q9HCX4 862 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 ZNF212Q9UDV6 495 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 STX8Q9UNK0 236 aa7.62□□□□□ -1.19
CNOT1-216ENST00000569240 PZPP20742 1482 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 H0Y3Z8 333 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 TNFRSF8P28908 595 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ST13P50502 369 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 CD302Q8IX05 232 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 PLEKHA4Q9H4M7 779 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 SAR1AQ9NR31 198 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 GOLGA8JA6NMD2 632 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 TAF5LO75529 589 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 TNNI2P48788 182 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 UBE3CQ15386 1083 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 KYNUQ16719 465 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ALKBH5Q6P6C2 394 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 APOA5Q6Q788 366 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 TOGARAM2Q6ZUX3 1019 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 DHX40Q8IX18 779 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 AFAP1Q8N556 730 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 MRPS26Q9BYN8 205 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 OSBPL8Q9BZF1 889 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ATG3Q9NT62 314 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms