RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 PTCH2Q9Y6C5 1203 aa9.6□□□□□ -0.87
CDH11-216ENST00000569128 WDR64B1ANS9 1081 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 LRRN2O75325 713 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 CBX7O95931 251 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 H2AFB1P0C5Y9 115 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 FSTP19883 344 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 TIMM10P62072 90 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 CHRNDQ07001 517 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 HSP90AB4PQ58FF6 505 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 DALRD3Q5D0E6 543 aaKnown RBP9.59□□□□□ -0.87
CDH11-216ENST00000569128 SFRP5Q5T4F7 317 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 GPAT2Q6NUI2 795 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
CDH11-216ENST00000569128 VGLL2Q8N8G2 317 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 ST13P5Q8NFI4 369 aaPredicted RBP9.59□□□□□ -0.87
CDH11-216ENST00000569128 MORC4Q8TE76 937 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 DBNDD2Q9BQY9 259 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 ASPNQ9BXN1 380 aa9.59□□□□□ -0.87
CDH11-216ENST00000569128 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.87
CDH11-216ENST00000569128 LRP5O75197 1615 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 MSTNO14793 375 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 PEX14O75381 377 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 ADORA1P30542 326 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 GPSM2P81274 684 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 NKAPLQ5M9Q1 402 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 TSHZ3Q63HK5 1081 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 STYK1Q6J9G0 422 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 ERC1Q8IUD2 1116 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 NLGN2Q8NFZ4 835 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 FBXL18Q96ME1 805 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 HAUS7Q99871 368 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 GEMIN8Q9NWZ8 242 aaKnown RBP9.58□□□□□ -0.88
CDH11-216ENST00000569128 GTF2IRD1Q9UHL9 959 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 FPGT-TNNI3KV9GXZ4 949 aa9.58□□□□□ -0.88
CDH11-216ENST00000569128 BBOX1O75936 387 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 PDE8BO95263 885 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 ASMTLO95671 621 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 TBX4P57082 545 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 CYP27A1Q02318 531 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 RSPO4Q2I0M5 234 aaPredicted RBP9.57□□□□□ -0.88
CDH11-216ENST00000569128 EEPD1Q7L9B9 569 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 AACSQ86V21 672 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 SHKBP1Q8TBC3 707 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 NEUROD6Q96NK8 337 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 GPR101Q96P66 508 aaPredicted RBP9.57□□□□□ -0.88
CDH11-216ENST00000569128 GABBR1Q9UBS5 961 aa9.57□□□□□ -0.88
CDH11-216ENST00000569128 MROH5Q6ZUA9 1318 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 SALL3Q9BXA9 1300 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 KIAA1551Q9HCM1 1747 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 KIF13BQ9NQT8 1826 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 CACNA1SQ13698 1873 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 A0A1B0GUL7 405 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 PRR33A8MZF0 331 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 CBFA2T2O43439 604 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 SUSD5O60279 629 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 EPHX1P07099 455 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 FGFR2P21802 821 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 KLRK1P26718 216 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 TGFB2P61812 414 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 SSRP1Q08945 709 aaKnown RBP9.56□□□□□ -0.88
CDH11-216ENST00000569128 AUHQ13825 339 aaKnown RBP9.56□□□□□ -0.88
CDH11-216ENST00000569128 ATP2B3Q16720 1220 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
CDH11-216ENST00000569128 SP8Q8IXZ3 490 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 C7orf61Q8IZ16 206 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
CDH11-216ENST00000569128 OSBPL1AQ9BXW6 950 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 SUSD2Q9UGT4 822 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 ZMYM5Q9UJ78 669 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 DBNLQ9UJU6 430 aaKnown RBP9.56□□□□□ -0.88
CDH11-216ENST00000569128 CD2APQ9Y5K6 639 aa9.56□□□□□ -0.88
CDH11-216ENST00000569128 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
CDH11-216ENST00000569128 PDE1AP54750 535 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 EXOSC10Q01780 885 aaKnown RBP9.55□□□□□ -0.88
CDH11-216ENST00000569128 NBPF9Q3BBW0 867 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 SPATC1Q76KD6 591 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 ZSWIM2Q8NEG5 633 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 SGSM3Q96HU1 749 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 COX4I2Q96KJ9 171 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 Q96M66 194 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 FGD4Q96M96 766 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 GPR108Q9NPR9 543 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 PFDN2Q9UHV9 154 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 FBXL21Q9UKT6 434 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 ATP8A1Q9Y2Q0 1164 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 ATP6V0A2Q9Y487 856 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 ZNF451Q9Y4E5 1061 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 U3KQE9 123 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 ZNF609O15014 1411 aa9.55□□□□□ -0.88
CDH11-216ENST00000569128 IGF2BP3O00425 579 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDH11-216ENST00000569128 SHOXO15266 292 aa9.54□□□□□ -0.88
CDH11-216ENST00000569128 GSC2O15499 205 aa9.54□□□□□ -0.88
CDH11-216ENST00000569128 CNGA1P29973 690 aa9.54□□□□□ -0.88
CDH11-216ENST00000569128 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
CDH11-216ENST00000569128 FAM181AQ8N9Y4 354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms