RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SLC26A2P50443 739 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 AK2P54819 239 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 IGBP1P78318 339 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 MRPS6P82932 125 aaKnown RBP8.88□□□□□ -0.99
CDH3-209ENST00000569080 SSRP1Q08945 709 aaKnown RBP8.88□□□□□ -0.99
CDH3-209ENST00000569080 FBXO47Q5MNV8 452 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 POTEBQ6S5H4 581 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 B3GNT9Q6UX72 402 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 SMAP1Q8IYB5 467 aaPredicted RBP8.88□□□□□ -0.99
CDH3-209ENST00000569080 BLIDQ8IZY5 108 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 ATP8B4Q8TF62 1192 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 SEPT8Q92599 483 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 APBB2Q92870 758 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 RAD9AQ99638 391 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 ZNF577Q9BSK1 485 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 IFIH1Q9BYX4 1025 aaKnown RBP8.88□□□□□ -0.99
CDH3-209ENST00000569080 AZI2Q9H6S1 392 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 AGO3Q9H9G7 860 aaKnown RBP8.88□□□□□ -0.99
CDH3-209ENST00000569080 CERS4Q9HA82 394 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 TRPC6Q9Y210 931 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 PCDHA2Q9Y5H9 948 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 MAFBQ9Y5Q3 323 aaPredicted RBP8.88□□□□□ -0.99
CDH3-209ENST00000569080 MTCH2Q9Y6C9 303 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 CDY2AQ9Y6F7 541 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 KIAA1671Q9BY89 1806 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 COL1A2P08123 1366 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 KDM3AQ9Y4C1 1321 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 CYP3A7-CYP3A51PA0A087WV96 503 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 SMIM35A0A1B0GVV1 85 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 KIF28PB7ZC32 967 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 ZNF862O60290 1169 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 TDP2O95551 362 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 C22orf31O95567 290 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 AMHP03971 560 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 RPLP2P05387 115 aaKnown RBP8.87□□□□□ -0.99
CDH3-209ENST00000569080 FDPSP14324 419 aaKnown RBP8.87□□□□□ -0.99
CDH3-209ENST00000569080 CYP3A7P24462 503 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 USP11P51784 963 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 NLRP5P59047 1200 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 ERVK-21P61565 698 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 KRT76Q01546 638 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 UGCGQ16739 394 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 ME3Q16798 604 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 KRT40Q6A162 431 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 MIS18BP1Q6P0N0 1132 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 MTHFD1LQ6UB35 978 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 MOXD1Q6UVY6 613 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 TSHZ1Q6ZSZ6 1077 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 MYOCDQ8IZQ8 938 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 CRIPAKQ8N1N5 446 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 ETNPPLQ8TBG4 499 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 TBCKQ8TEA7 893 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 ARNTL2Q8WYA1 636 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 SLC5A5Q92911 643 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 GTF3C6Q969F1 213 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 GJA10Q969M2 543 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 TOP1MTQ969P6 601 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 PHF20Q9BVI0 1012 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
CDH3-209ENST00000569080 FAM49AQ9H0Q0 323 aaPredicted RBP8.87□□□□□ -0.99
CDH3-209ENST00000569080 ZNF302Q9NR11 478 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 GJB4Q9NTQ9 266 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 TBC1D22BQ9NU19 505 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 KCNJ14Q9UNX9 436 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 EVPLQ92817 2033 aa8.87□□□□□ -0.99
CDH3-209ENST00000569080 BRWD1Q9NSI6 2320 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 DLL1O00548 723 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 BACH1O14867 736 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 SLC37A4O43826 429 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 HBP1O60381 514 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 PSMD10O75832 226 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 CDKL5O76039 1030 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 CENPBP07199 599 aaPredicted RBP8.86□□□□□ -0.99
CDH3-209ENST00000569080 IGFBP4P22692 258 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 GRB10Q13322 594 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 C8orf34Q49A92 452 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 Q4G0T1 1027 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 FAM160B1Q5W0V3 765 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 GALNT17Q6IS24 598 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 SWSAP1Q6NVH7 229 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 FAM117BQ6P1L5 589 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 CPLX2Q6PUV4 134 aaKnown RBP8.86□□□□□ -0.99
CDH3-209ENST00000569080 RSPH3Q86UC2 560 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 LINC01465Q8N7H1 131 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 OXER1Q8TDS5 423 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 GDPD5Q8WTR4 605 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 TMEM40Q8WWA1 233 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 TNFRSF25Q93038 417 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 RIT2Q99578 217 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 C17orf80Q9BSJ5 609 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 SLKQ9H2G2 1235 aaPredicted RBP8.86□□□□□ -0.99
CDH3-209ENST00000569080 UNC45AQ9H3U1 944 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 SUGCTQ9HAC7 445 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 INSL6Q9Y581 213 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 PCDHA10Q9Y5I2 948 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 TRPV2Q9Y5S1 764 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 SQORQ9Y6N5 450 aa8.86□□□□□ -0.99
CDH3-209ENST00000569080 ARID2Q68CP9 1835 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms