RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 FAM49AQ9H0Q0 323 aaPredicted RBP14.34□□□□□ -0.11
SNX29-207ENST00000568949 TLR9Q9NR96 1032 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
SNX29-207ENST00000568949 PCDHGC5Q9Y5F6 944 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 PLXNA3P51805 1871 aa14.33□□□□□ -0.11
SNX29-207ENST00000568949 ERICH2A1L162 156 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 IFIT3O14879 490 aaKnown RBP14.33□□□□□ -0.12
SNX29-207ENST00000568949 PER2O15055 1255 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 INSRRP14616 1297 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 SARSP49591 514 aaKnown RBP14.33□□□□□ -0.12
SNX29-207ENST00000568949 IGBP1P78318 339 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 PLEKHM2Q8IWE5 1019 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 RIPOR3Q96MK2 946 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 CELF4Q9BZC1 486 aaKnown RBP14.33□□□□□ -0.12
SNX29-207ENST00000568949 S1PR5Q9H228 398 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 PCDHA2Q9Y5H9 948 aa14.33□□□□□ -0.12
SNX29-207ENST00000568949 FNDC1Q4ZHG4 1894 aaPredicted RBP14.32□□□□□ -0.12
SNX29-207ENST00000568949 FSCN2O14926 492 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 MAFGO15525 162 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 ITGB5P18084 799 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 GATMP50440 423 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 KCNC3Q14003 757 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 WTAPQ15007 396 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 SMC5Q8IY18 1101 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 NME8Q8N427 588 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 TMX1Q9H3N1 280 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 PCDHB7Q9Y5E2 793 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 UBIAD1Q9Y5Z9 338 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 MYO10Q9HD67 2058 aa14.32□□□□□ -0.12
SNX29-207ENST00000568949 USP34Q70CQ2 3546 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 SMIM35A0A1B0GVV1 85 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
SNX29-207ENST00000568949 FGF18O76093 207 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 SMARCA1P28370 1054 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 ERVFC1P60507 584 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
SNX29-207ENST00000568949 KRT76Q01546 638 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 MTMR1Q13613 665 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 SART3Q15020 963 aaKnown RBP14.31□□□□□ -0.12
SNX29-207ENST00000568949 SPOUT1Q5T280 376 aaKnown RBP14.31□□□□□ -0.12
SNX29-207ENST00000568949 ANKRD54Q6NXT1 300 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 CATIPQ7Z7H3 387 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 ZBTB33Q86T24 672 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 RASGRP4Q8TDF6 673 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
SNX29-207ENST00000568949 PCYT2Q99447 389 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 MAP3K14Q99558 947 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 C1orf112Q9NSG2 853 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 LZTS1Q9Y250 596 aa14.31□□□□□ -0.12
SNX29-207ENST00000568949 H0Y858 1186 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 HOXB8P17481 243 aaPredicted RBP14.3□□□□□ -0.12
SNX29-207ENST00000568949 TMEM62Q0P6H9 643 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 ODR4Q5SWX8 454 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 SYCE2Q6PIF2 218 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 UBALD2Q8IYN6 164 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 THNSL1Q8IYQ7 743 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 AZI2Q9H6S1 392 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 ERVK-5Q9HDB9 667 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 JPH1Q9HDC5 661 aaPredicted RBP14.3□□□□□ -0.12
SNX29-207ENST00000568949 JADE2Q9NQC1 790 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 TRPC6Q9Y210 931 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 NR2E1Q9Y466 385 aa14.3□□□□□ -0.12
SNX29-207ENST00000568949 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
SNX29-207ENST00000568949 TBKBP1A7MCY6 615 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 PDGFBP01127 241 aaPredicted RBP14.29□□□□□ -0.12
SNX29-207ENST00000568949 TECP42680 631 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
SNX29-207ENST00000568949 PLCB4Q15147 1175 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 SLC24A5Q71RS6 500 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 PLPPR4Q7Z2D5 763 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
SNX29-207ENST00000568949 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 LZTS2Q9BRK4 669 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 RGS18Q9NS28 235 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 TYW1Q9NV66 732 aaKnown RBP14.29□□□□□ -0.12
SNX29-207ENST00000568949 TMEM260Q9NX78 707 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 SLC9A2Q9UBY0 812 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 SEC63Q9UGP8 760 aaKnown RBP14.29□□□□□ -0.12
SNX29-207ENST00000568949 PUF60Q9UHX1 559 aaKnown RBP14.29□□□□□ -0.12
SNX29-207ENST00000568949 CFAP54Q96N23 3096 aa14.29□□□□□ -0.12
SNX29-207ENST00000568949 C9IYK1 514 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 CYP21A2P08686 494 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 LAG3P18627 525 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 KIF5BP33176 963 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 NBL1P41271 181 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 STAT5BP51692 787 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 NUCB1Q02818 461 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
SNX29-207ENST00000568949 TMEM266Q2M3C6 531 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms