RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 EIF4EBP3O60516 100 aaPredicted RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 MSCO60682 206 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 TIAF1O95411 115 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 MAP4K4O95819 1239 aaPredicted RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 ASNSP08243 561 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 CYP2C19P33261 490 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 IL15P40933 162 aaPredicted RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 INPP5AQ14642 412 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 LRRC14Q15048 493 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 WDR78Q5VTH9 848 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 MFSD14CQ5VZR4 134 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 FBXL19Q6PCT2 694 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 SLC39A5Q6ZMH5 540 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 USP38Q8NB14 1042 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 SMG8Q8ND04 991 aaKnown RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 TRPV1Q8NER1 839 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 SH3RF3Q8TEJ3 882 aaPredicted RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 NSUN4Q96CB9 384 aaKnown RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 KRT82Q9NSB4 513 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 PI4KBQ9UBF8 816 aa6.9□□□□□ -1.3
CDH13-211ENST00000568770 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 PA2G4Q9UQ80 394 aaKnown RBP6.9□□□□□ -1.3
CDH13-211ENST00000568770 TRIM43BA6NCK2 446 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 SLC15A5A6NIM6 579 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 KBTBD13C9JR72 458 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 CNMDO75829 334 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 GLRX3O76003 335 aaKnown RBP6.89□□□□□ -1.31
CDH13-211ENST00000568770 LDHCP07864 332 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 RLBP1P12271 317 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 GLB1P16278 677 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 PREPP48147 710 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 GSTO1P78417 241 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 LMNB2Q03252 620 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 SOX4Q06945 474 aaPredicted RBP6.89□□□□□ -1.31
CDH13-211ENST00000568770 TRIM60Q495X7 471 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 ANO1Q5XXA6 986 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 TRIM42Q8IWZ5 723 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 C12orf50Q8NA57 414 aaPredicted RBP6.89□□□□□ -1.31
CDH13-211ENST00000568770 SPATA5Q8NB90 893 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 TRIM43Q96BQ3 446 aaPredicted RBP6.89□□□□□ -1.31
CDH13-211ENST00000568770 DHX36Q9H2U1 1008 aaKnown RBP6.89□□□□□ -1.31
CDH13-211ENST00000568770 DNAJC18Q9H819 358 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 SUGCTQ9HAC7 445 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 PDLIM7Q9NR12 457 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 RAD18Q9NS91 495 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 RAI14Q9P0K7 980 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 HMG20BQ9P0W2 317 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 PCDHA4Q9UN74 947 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 A0A0G2JMZ2 1700 aa6.89□□□□□ -1.31
CDH13-211ENST00000568770 TMEM265A0A087WTH1 108 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 A0A1B0GUL7 405 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 FAM221AA4D161 298 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 TMPRSS2O15393 492 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 F13A1P00488 732 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 HOXC6P09630 235 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 UBTFL1P0CB47 393 aaPredicted RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 CYBAP13498 195 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 ITGB8P26012 769 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 EIF4A3P38919 411 aaKnown RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 PLA2G5P39877 138 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 EPHB4P54760 987 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 CCNA1P78396 465 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 GRB14Q14449 540 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 MVPQ14764 893 aaKnown RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 SNX17Q15036 470 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 ZYXQ15942 572 aaKnown RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 ZC3H12AQ5D1E8 599 aaKnown RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 CRACR2BQ8N4Y2 399 aaPredicted RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 GOLM1Q8NBJ4 401 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 FBXO27Q8NI29 283 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 FERMT2Q96AC1 680 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 RNPC3Q96LT9 517 aaKnown RBP6.88□□□□□ -1.31
CDH13-211ENST00000568770 AATFQ9NY61 560 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH13-211ENST00000568770 PALD1Q9ULE6 856 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 RABGAP1Q9Y3P9 1069 aa6.88□□□□□ -1.31
CDH13-211ENST00000568770 FLT1P17948 1338 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 DCDC2CA8MYV0 355 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 GREM1O60565 184 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 ADH5P11766 374 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 ADCYAP1R1P41586 468 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 GATA4P43694 442 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 TFCP2Q12800 502 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 PWP1Q13610 501 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 LRFN4Q6PJG9 635 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 C12orf40Q86WS4 652 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 FOXP4Q8IVH2 680 aaPredicted RBP6.87□□□□□ -1.31
CDH13-211ENST00000568770 MAPKAPK5Q8IW41 473 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 ARMC10Q8N2F6 343 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
CDH13-211ENST00000568770 PPM1EQ8WY54 764 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 FAM122AQ96E09 287 aa6.87□□□□□ -1.31
CDH13-211ENST00000568770 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms