RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 EFCC1Q9HA90 598 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 USP40Q9NVE5 1235 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 ARMCX3Q9UH62 379 aaPredicted RBP20.06■□□□□ 0.8
PKD1-235ENST00000568591 CRY2Q49AN0 593 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 ALKBH5Q6P6C2 394 aaKnown RBP20.06■□□□□ 0.8
PKD1-235ENST00000568591 ARHGAP27Q6ZUM4 889 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
PKD1-235ENST00000568591 MYH4Q9Y623 1939 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
PKD1-235ENST00000568591 CPP00450 1065 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 SPATA31C1P0DKV0 1188 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 ZBTB48P10074 688 aaPredicted RBP20.05■□□□□ 0.8
PKD1-235ENST00000568591 GCFC2P16383 781 aaKnown RBP20.05■□□□□ 0.8
PKD1-235ENST00000568591 USP11P51784 963 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 MREGQ8N565 214 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 CYP2W1Q8TAV3 490 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 TAF4BQ92750 862 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 DNAJC18Q9H819 358 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 TMCO5BA8MYB1 307 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 MEIS2O14770 477 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 HSD17B3P37058 310 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 EXOC3L4Q17RC7 722 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 SLF2Q8IX21 1173 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 ATP6V1G3Q96LB4 118 aa20.05■□□□□ 0.8
PKD1-235ENST00000568591 TAF1DQ9H5J8 278 aaPredicted RBP20.05■□□□□ 0.8
PKD1-235ENST00000568591 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 SART1O43290 800 aaKnown RBP20.04■□□□□ 0.8
PKD1-235ENST00000568591 EDRF1Q3B7T1 1238 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 SIX2Q9NPC8 291 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 AMACRQ9UHK6 382 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 NOC2LQ9Y3T9 749 aaKnown RBP20.04■□□□□ 0.8
PKD1-235ENST00000568591 FAM86B1E9PN63 330 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 AFPP02771 609 aaKnown RBP20.04■□□□□ 0.8
PKD1-235ENST00000568591 FAM86B2P0C5J1 330 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 TNNC1P63316 161 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 DOK7Q18PE1 504 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
PKD1-235ENST00000568591 NAA35Q5VZE5 725 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 ETNPPLQ8TBG4 499 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 SCFD2Q8WU76 684 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 RUSC1Q9BVN2 902 aa20.04■□□□□ 0.8
PKD1-235ENST00000568591 CELF4Q9BZC1 486 aaKnown RBP20.04■□□□□ 0.8
PKD1-235ENST00000568591 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 HSPA9P38646 679 aaKnown RBP20.03■□□□□ 0.8
PKD1-235ENST00000568591 TCP10Q12799 353 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 ITGB3BPQ13352 177 aaPredicted RBP20.03■□□□□ 0.8
PKD1-235ENST00000568591 USH1GQ495M9 461 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 ICE2Q659A1 982 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 KSR1Q8IVT5 923 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 TPCN2Q8NHX9 752 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 WHAMMQ8TF30 809 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 PCDHB13Q9Y5F0 798 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 ASTN1O14525 1302 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 BACH1O14867 736 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 SERPINB2P05120 415 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 XRCC5P13010 732 aaKnown RBP20.03■□□□□ 0.8
PKD1-235ENST00000568591 ARHGAP4P98171 946 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 HDLBPQ00341 1268 aaKnown RBP20.03■□□□□ 0.8
PKD1-235ENST00000568591 EPHA7Q15375 998 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 GPATCH4Q5T3I0 446 aaKnown RBP20.03■□□□□ 0.8
PKD1-235ENST00000568591 CDC42EP5Q6NZY7 148 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 LENG9Q96B70 501 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 OSGEPQ9NPF4 335 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 NR2E1Q9Y466 385 aa20.03■□□□□ 0.8
PKD1-235ENST00000568591 DDX3XO00571 662 aaKnown RBP eCLIP20.02■□□□□ 0.8
PKD1-235ENST00000568591 CHRM1P11229 460 aaPredicted RBP20.02■□□□□ 0.8
PKD1-235ENST00000568591 INPP5BP32019 993 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 PTGISQ16647 500 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 CD302Q8IX05 232 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 ISCUQ9H1K1 167 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 BHMT2Q9H2M3 363 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 RGL1Q9NZL6 768 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 TRAF3IP3Q9Y228 551 aa20.02■□□□□ 0.8
PKD1-235ENST00000568591 DCDC2CA8MYV0 355 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 H0YGN5 161 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 PPP1R37O75864 691 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 GFPT2O94808 682 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 KCNV1Q6PIU1 500 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 EPM2AIP1Q7L775 607 aaPredicted RBP20.02■□□□□ 0.79
PKD1-235ENST00000568591 SLC35C1Q96A29 364 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 RBM17Q96I25 401 aaKnown RBP20.02■□□□□ 0.79
PKD1-235ENST00000568591 EPN3Q9H201 632 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 GCNT4Q9P109 453 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 NFS1Q9Y697 457 aa20.02■□□□□ 0.79
PKD1-235ENST00000568591 ZBTB39O15060 712 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 DAPK3O43293 454 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 NR3C1P04150 777 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 EEF2P13639 858 aaKnown RBP20.01■□□□□ 0.79
PKD1-235ENST00000568591 GYS1P13807 737 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 COPB2P35606 906 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 CERKQ8TCT0 537 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 ZNF473Q8WTR7 871 aaKnown RBP20.01■□□□□ 0.79
PKD1-235ENST00000568591 U2AF1L4Q8WU68 220 aaKnown RBP20.01■□□□□ 0.79
PKD1-235ENST00000568591 TMBIM4Q9HC24 238 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 PPANQ9NQ55 473 aaKnown RBP20.01■□□□□ 0.79
PKD1-235ENST00000568591 MYO1FO00160 1098 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 GCNT3O95395 438 aa20.01■□□□□ 0.79
PKD1-235ENST00000568591 HOXA13P31271 388 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms